STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP87842.1Hypothetical protein. (321 aa)    
Predicted Functional Partners:
SFP87795.1
ABC-type transport system, involved in lipoprotein release, permease component.
 
     0.955
SFP87746.1
Nitrous oxide reductase accessory protein NosL.
 
     0.955
SFP87816.1
Putative ABC transport system ATP-binding protein.
 
     0.911
SFP87861.1
Hypothetical protein.
       0.790
SFP87772.1
Hypothetical protein.
       0.788
SFP43443.1
Hypothetical protein.
 
     0.724
SFP87687.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
       0.484
SFP87710.1
Two-component system, OmpR family, sensor kinase.
       0.484
SFP87611.1
Outer membrane protein TolC.
 
     0.480
SFP76330.1
FmdE, Molybdenum formylmethanofuran dehydrogenase operon.
  
     0.460
Your Current Organism:
Hydrogenimonas thermophila
NCBI taxonomy Id: 223786
Other names: ATCC BAA-737, H. thermophila, Hydrogenimonas thermophila Takai et al. 2004, JCM 11971, strain EP1-55-1%
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.