Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFO86683.1 | SFP97008.1 | SAMN05216234_10110 | SAMN05216234_1674 | AAA domain-containing protein, putative AbiEii toxin, Type IV TA system. | Hypothetical protein. | 0.495 |
SFP67459.1 | SFP97008.1 | SAMN05216234_1324 | SAMN05216234_1674 | Copper-resistance protein, CopA family. | Hypothetical protein. | 0.590 |
SFP96953.1 | SFP96984.1 | SAMN05216234_1672 | SAMN05216234_1673 | Plasma-membrane calcium-translocating P-type ATPase. | Protein of unknown function. | 0.768 |
SFP96953.1 | SFP97008.1 | SAMN05216234_1672 | SAMN05216234_1674 | Plasma-membrane calcium-translocating P-type ATPase. | Hypothetical protein. | 0.604 |
SFP96953.1 | SFP97035.1 | SAMN05216234_1672 | SAMN05216234_1675 | Plasma-membrane calcium-translocating P-type ATPase. | Predicted permease. | 0.594 |
SFP96953.1 | SFP97056.1 | SAMN05216234_1672 | SAMN05216234_1676 | Plasma-membrane calcium-translocating P-type ATPase. | Aerotaxis receptor. | 0.427 |
SFP96953.1 | atpA | SAMN05216234_1672 | SAMN05216234_13414 | Plasma-membrane calcium-translocating P-type ATPase. | ATP synthase F1 subcomplex alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | 0.694 |
SFP96953.1 | atpB | SAMN05216234_1672 | SAMN05216234_11253 | Plasma-membrane calcium-translocating P-type ATPase. | ATP synthase F0 subcomplex A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family. | 0.627 |
SFP96953.1 | atpE | SAMN05216234_1672 | SAMN05216234_10587 | Plasma-membrane calcium-translocating P-type ATPase. | ATP synthase F0 subcomplex C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.831 |
SFP96984.1 | SFP96953.1 | SAMN05216234_1673 | SAMN05216234_1672 | Protein of unknown function. | Plasma-membrane calcium-translocating P-type ATPase. | 0.768 |
SFP96984.1 | SFP97008.1 | SAMN05216234_1673 | SAMN05216234_1674 | Protein of unknown function. | Hypothetical protein. | 0.598 |
SFP96984.1 | SFP97035.1 | SAMN05216234_1673 | SAMN05216234_1675 | Protein of unknown function. | Predicted permease. | 0.598 |
SFP96984.1 | SFP97056.1 | SAMN05216234_1673 | SAMN05216234_1676 | Protein of unknown function. | Aerotaxis receptor. | 0.430 |
SFP97008.1 | SFO86683.1 | SAMN05216234_1674 | SAMN05216234_10110 | Hypothetical protein. | AAA domain-containing protein, putative AbiEii toxin, Type IV TA system. | 0.495 |
SFP97008.1 | SFP67459.1 | SAMN05216234_1674 | SAMN05216234_1324 | Hypothetical protein. | Copper-resistance protein, CopA family. | 0.590 |
SFP97008.1 | SFP96953.1 | SAMN05216234_1674 | SAMN05216234_1672 | Hypothetical protein. | Plasma-membrane calcium-translocating P-type ATPase. | 0.604 |
SFP97008.1 | SFP96984.1 | SAMN05216234_1674 | SAMN05216234_1673 | Hypothetical protein. | Protein of unknown function. | 0.598 |
SFP97008.1 | SFP97035.1 | SAMN05216234_1674 | SAMN05216234_1675 | Hypothetical protein. | Predicted permease. | 0.956 |
SFP97008.1 | SFP97056.1 | SAMN05216234_1674 | SAMN05216234_1676 | Hypothetical protein. | Aerotaxis receptor. | 0.594 |
SFP97008.1 | atpA | SAMN05216234_1674 | SAMN05216234_13414 | Hypothetical protein. | ATP synthase F1 subcomplex alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | 0.475 |
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