STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BTW10_08960Unannotated protein. (255 aa)    
Predicted Functional Partners:
GCA_000821045_00621
Unannotated protein.
  0.997
BTW10_08955
Unannotated protein.
 0.991
BTW10_17415
Unannotated protein.
  0.987
BTW10_08950
Unannotated protein.
 
 
 0.977
BTW10_00140
Unannotated protein.
  0.950
BTW10_08945
Unannotated protein.
 
  0.943
BTW10_05150
Unannotated protein; Belongs to the bacterial solute-binding protein 3 family.
  0.917
BTW10_00135
Unannotated protein.
  
  0.914
BTW10_10045
Unannotated protein.
 
    
 0.889
modB
Unannotated protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
      0.879
Your Current Organism:
Chromohalobacter japonicus
NCBI taxonomy Id: 223900
Other names: C. japonicus, CCM 7416, CECT 7219, Chromohalobacter japonicus Sanchez-Porro et al. 2007, Chromohalobacter sp. 43, strain 43
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.