STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BTW10_09820Unannotated protein; Belongs to the WrbA family. (209 aa)    
Predicted Functional Partners:
BTW10_14575
Unannotated protein.
  
  
 
0.901
BTW10_09815
Unannotated protein.
       0.811
BTW10_09810
Unannotated protein.
       0.773
BTW10_09825
Unannotated protein.
  
    0.756
BTW10_05835
Unannotated protein.
   
    0.731
BTW10_07880
Unannotated protein.
   
    0.713
BTW10_00590
Unannotated protein; Belongs to the Dps family.
  
  
 0.655
GCA_000821045_02833
Unannotated protein.
  
  
 0.589
BTW10_08595
Unannotated protein.
   
    0.575
GCA_000821045_00923
Unannotated protein.
   
    0.571
Your Current Organism:
Chromohalobacter japonicus
NCBI taxonomy Id: 223900
Other names: C. japonicus, CCM 7416, CECT 7219, Chromohalobacter japonicus Sanchez-Porro et al. 2007, Chromohalobacter sp. 43, strain 43
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.