STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BTW10_16755Unannotated protein. (377 aa)    
Predicted Functional Partners:
GCA_000821045_02074
Unannotated protein.
  
 0.938
BTW10_07545
Unannotated protein.
    
 0.918
BTW10_15270
Unannotated protein; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
    
 0.918
GCA_000821045_01873
Unannotated protein.
    
 0.901
BTW10_04690
Unannotated protein; Belongs to the aldehyde dehydrogenase family.
 
 
  0.873
BTW10_01865
Unannotated protein.
   
 
 0.848
BTW10_06455
Unannotated protein; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family.
  
 0.833
BTW10_14915
Unannotated protein.
  
 0.825
BTW10_01575
Unannotated protein.
    
 0.789
BTW10_09745
Unannotated protein.
  
 
 0.773
Your Current Organism:
Chromohalobacter japonicus
NCBI taxonomy Id: 223900
Other names: C. japonicus, CCM 7416, CECT 7219, Chromohalobacter japonicus Sanchez-Porro et al. 2007, Chromohalobacter sp. 43, strain 43
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.