STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BTW10_17525Unannotated protein. (186 aa)    
Predicted Functional Partners:
BTW10_17530
Unannotated protein.
 
    0.875
BTW10_17515
Unannotated protein.
  
    0.836
birA
Unannotated protein; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio-5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon.
  
    0.801
BTW10_13820
Unannotated protein; Belongs to the precorrin methyltransferase family.
    
 0.796
BTW10_14410
Unannotated protein.
    
 0.796
BTW10_05425
Unannotated protein.
  
  
 0.773
queF
Unannotated protein; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1).
 
   
 0.709
BTW10_17510
Unannotated protein.
  
    0.623
BTW10_14780
Unannotated protein.
  
    0.618
BTW10_07765
Unannotated protein.
 
 
   0.572
Your Current Organism:
Chromohalobacter japonicus
NCBI taxonomy Id: 223900
Other names: C. japonicus, CCM 7416, CECT 7219, Chromohalobacter japonicus Sanchez-Porro et al. 2007, Chromohalobacter sp. 43, strain 43
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.