STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BTW10_01380Unannotated protein. (445 aa)    
Predicted Functional Partners:
BTW10_13235
Unannotated protein; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence.
   
    0.680
GCA_000821045_02605
Unannotated protein.
  
    0.503
dadA
Unannotated protein; Oxidative deamination of D-amino acids.
       0.473
GCA_000821045_00918
Unannotated protein.
   
    0.471
gapA
Unannotated protein; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
   
    0.471
BTW10_01630
Unannotated protein; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
   
    0.471
BTW10_09060
Unannotated protein; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
   
    0.471
BTW10_15495
Unannotated protein; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
   
    0.471
BTW10_04945
Unannotated protein.
  
     0.448
BTW10_12835
Unannotated protein.
  
     0.430
Your Current Organism:
Chromohalobacter japonicus
NCBI taxonomy Id: 223900
Other names: C. japonicus, CCM 7416, CECT 7219, Chromohalobacter japonicus Sanchez-Porro et al. 2007, Chromohalobacter sp. 43, strain 43
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.