STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
opgHUnannotated protein; Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs). (833 aa)    
Predicted Functional Partners:
BTW10_01220
Unannotated protein; Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs).
  
 0.978
mdoD
Unannotated protein; Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs).
  
 0.845
BTW10_01230
Unannotated protein.
       0.515
BTW10_01865
Unannotated protein.
     
 0.484
BTW10_01235
Unannotated protein.
     
 0.428
Your Current Organism:
Chromohalobacter japonicus
NCBI taxonomy Id: 223900
Other names: C. japonicus, CCM 7416, CECT 7219, Chromohalobacter japonicus Sanchez-Porro et al. 2007, Chromohalobacter sp. 43, strain 43
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.