STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rimKUnannotated protein; Belongs to the RimK family. (302 aa)    
Predicted Functional Partners:
BTW10_12240
Unannotated protein.
     0.993
BTW10_11995
Unannotated protein.
     0.801
BTW10_09905
Unannotated protein.
 
     0.771
BTW10_12245
Unannotated protein.
       0.687
BTW10_12230
Unannotated protein.
       0.586
BTW10_14380
Unannotated protein; Belongs to the MurCDEF family.
    
0.473
BTW10_03525
Unannotated protein.
 
     0.437
BTW10_15460
Unannotated protein; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
  
  
 0.408
Your Current Organism:
Chromohalobacter japonicus
NCBI taxonomy Id: 223900
Other names: C. japonicus, CCM 7416, CECT 7219, Chromohalobacter japonicus Sanchez-Porro et al. 2007, Chromohalobacter sp. 43, strain 43
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.