STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BTW10_10995Unannotated protein. (421 aa)    
Predicted Functional Partners:
BTW10_02195
Unannotated protein.
  
    0.594
BTW10_11470
Unannotated protein.
  
    0.594
BTW10_07860
Unannotated protein.
  
    0.594
GCA_000821045_02900
Unannotated protein.
  
  
  0.555
BTW10_14495
Unannotated protein.
  
 
 0.546
BTW10_13250
Unannotated protein.
   
 
 0.542
BTW10_14390
Unannotated protein.
    
 0.509
BTW10_10980
Unannotated protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
    
 0.499
polA
Unannotated protein; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
     
 0.489
BTW10_06300
Unannotated protein.
 
  
 0.471
Your Current Organism:
Chromohalobacter japonicus
NCBI taxonomy Id: 223900
Other names: C. japonicus, CCM 7416, CECT 7219, Chromohalobacter japonicus Sanchez-Porro et al. 2007, Chromohalobacter sp. 43, strain 43
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.