STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BTW10_15445Unannotated protein. (205 aa)    
Predicted Functional Partners:
BTW10_15450
Unannotated protein.
       0.669
BTW10_15440
Unannotated protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
     0.621
BTW10_15435
Unannotated protein.
       0.518
pth
Unannotated protein; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.
   
    0.465
BTW10_15430
Unannotated protein.
 
     0.422
GCA_000821045_01873
Unannotated protein.
     
 0.420
BTW10_13125
Unannotated protein.
    
 
 0.416
BTW10_16910
Unannotated protein.
    
 
 0.416
BTW10_16405
Unannotated protein.
    
 
 0.416
Your Current Organism:
Chromohalobacter japonicus
NCBI taxonomy Id: 223900
Other names: C. japonicus, CCM 7416, CECT 7219, Chromohalobacter japonicus Sanchez-Porro et al. 2007, Chromohalobacter sp. 43, strain 43
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.