STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108734887Myosin heavy chain, muscle isoform X1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1951 aa)    
Predicted Functional Partners:
LOC108734709
Myosin light chain alkali.
   
 0.998
LOC108734710
Myosin light chain alkali-like.
   
 0.991
LOC108742518
Myosin-2 essential light chain isoform X1.
   
 0.966
LOC108737888
Troponin T isoform X2.
   
 0.963
LOC108735609
Paramyosin, short form-like.
   
   0.942
LOC108735226
Twitchin.
   
 0.942
LOC108733685
Myosin regulatory light chain sqh.
   
 0.928
LOC108743234
Myosin regulatory light chain 2.
   
 0.928
LOC108740953
Uncharacterized protein LOC108740953.
   
 0.895
LOC108733939
Alpha-actinin, sarcomeric isoform X3.
   
 0.859
Your Current Organism:
Agrilus planipennis
NCBI taxonomy Id: 224129
Other names: A. planipennis, Agrilus feretrius, Agrilus marcopoli, emerald ash borer
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