Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC108732824 | LOC108733260 | A0A1W4W599 | A0A1W4WIL0 | DDB1- and CUL4-associated factor 13. | ESF1 homolog. | 0.933 |
LOC108732824 | LOC108734902 | A0A1W4W599 | A0A1W4WE04 | DDB1- and CUL4-associated factor 13. | Probable ATP-dependent RNA helicase DDX47; Belongs to the DEAD box helicase family. | 0.967 |
LOC108732824 | LOC108735086 | A0A1W4W599 | A0A1W4WEP9 | DDB1- and CUL4-associated factor 13. | Probable ATP-dependent RNA helicase DDX49; Belongs to the DEAD box helicase family. | 0.964 |
LOC108732824 | LOC108736895 | A0A1W4W599 | A0A1W4WXX6 | DDB1- and CUL4-associated factor 13. | Protein RRP5 homolog. | 0.999 |
LOC108732824 | LOC108738110 | A0A1W4W599 | A0A1W4X3F6 | DDB1- and CUL4-associated factor 13. | Neuroguidin. | 0.999 |
LOC108732824 | LOC108740291 | A0A1W4W599 | A0A1W4XB80 | DDB1- and CUL4-associated factor 13. | Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. | 0.640 |
LOC108732824 | LOC108740405 | A0A1W4W599 | A0A1W4XBL7 | DDB1- and CUL4-associated factor 13. | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | 0.999 |
LOC108732824 | LOC108742766 | A0A1W4W599 | A0A1W4XMH0 | DDB1- and CUL4-associated factor 13. | Probable ATP-dependent RNA helicase DDX52; Belongs to the DEAD box helicase family. | 0.989 |
LOC108732824 | LOC108744416 | A0A1W4W599 | A0A1W4XHR5 | DDB1- and CUL4-associated factor 13. | Nucleolar protein 14 homolog isoform X1. | 0.999 |
LOC108732824 | LOC108744420 | A0A1W4W599 | A0A1W4XT78 | DDB1- and CUL4-associated factor 13. | Probable rRNA-processing protein EBP2 homolog isoform X2. | 0.874 |
LOC108733260 | LOC108732824 | A0A1W4WIL0 | A0A1W4W599 | ESF1 homolog. | DDB1- and CUL4-associated factor 13. | 0.933 |
LOC108733260 | LOC108734902 | A0A1W4WIL0 | A0A1W4WE04 | ESF1 homolog. | Probable ATP-dependent RNA helicase DDX47; Belongs to the DEAD box helicase family. | 0.995 |
LOC108733260 | LOC108735086 | A0A1W4WIL0 | A0A1W4WEP9 | ESF1 homolog. | Probable ATP-dependent RNA helicase DDX49; Belongs to the DEAD box helicase family. | 0.736 |
LOC108733260 | LOC108736895 | A0A1W4WIL0 | A0A1W4WXX6 | ESF1 homolog. | Protein RRP5 homolog. | 0.967 |
LOC108733260 | LOC108738110 | A0A1W4WIL0 | A0A1W4X3F6 | ESF1 homolog. | Neuroguidin. | 0.963 |
LOC108733260 | LOC108740291 | A0A1W4WIL0 | A0A1W4XB80 | ESF1 homolog. | Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. | 0.495 |
LOC108733260 | LOC108740405 | A0A1W4WIL0 | A0A1W4XBL7 | ESF1 homolog. | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | 0.978 |
LOC108733260 | LOC108742766 | A0A1W4WIL0 | A0A1W4XMH0 | ESF1 homolog. | Probable ATP-dependent RNA helicase DDX52; Belongs to the DEAD box helicase family. | 0.838 |
LOC108733260 | LOC108744416 | A0A1W4WIL0 | A0A1W4XHR5 | ESF1 homolog. | Nucleolar protein 14 homolog isoform X1. | 0.938 |
LOC108733260 | LOC108744420 | A0A1W4WIL0 | A0A1W4XT78 | ESF1 homolog. | Probable rRNA-processing protein EBP2 homolog isoform X2. | 0.933 |
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