STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108733139Apoptosis-inducing factor 1, mitochondrial. (438 aa)    
Predicted Functional Partners:
LOC108740105
D-aspartate oxidase-like.
  
 0.901
LOC108742477
LOW QUALITY PROTEIN: D-aspartate oxidase.
  
 0.901
LOC108739851
Thioredoxin reductase 2, mitochondrial isoform X1.
   
 0.871
LOC108742990
Peptidyl-prolyl cis-trans isomerase-like 6 isoform X1.
    
 0.854
LOC108733419
Adrenodoxin-like protein, mitochondrial.
  
 0.849
LOC108738594
Adrenodoxin.
  
 0.849
LOC108735925
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
  
 
 0.831
LOC108739260
Endonuclease.
    
 
 0.819
LOC108744977
Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.
     
 0.810
LOC108735281
Pyrazinamidase/nicotinamidase isoform X1.
    
 0.747
Your Current Organism:
Agrilus planipennis
NCBI taxonomy Id: 224129
Other names: A. planipennis, Agrilus feretrius, Agrilus marcopoli, emerald ash borer
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