STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108734319Uncharacterized protein LOC108734319. (555 aa)    
Predicted Functional Partners:
LOC108734869
Histone H2A; Belongs to the histone H2A family.
   
 
 0.964
LOC108743412
Exportin-1.
   
 0.840
LOC108737414
Nuclear pore complex protein Nup214 isoform X1.
     
 0.756
LOC108735142
Radial spoke head protein 6 homolog A.
    
 0.654
LOC108741858
exportin-6-B isoform X1.
    
 0.654
LOC108740211
Exportin-5.
    
 0.654
LOC108739312
DNA methyltransferase 1-associated protein 1 isoform X1.
    
 
 0.640
LOC108736149
DNA-(apurinic or apyrimidinic site) lyase; Belongs to the DNA repair enzymes AP/ExoA family.
   
 
 0.593
LOC108743146
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
    0.553
LOC108739087
Vacuolar protein sorting-associated protein 72 homolog.
    
 
 0.527
Your Current Organism:
Agrilus planipennis
NCBI taxonomy Id: 224129
Other names: A. planipennis, Agrilus feretrius, Agrilus marcopoli, emerald ash borer
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.