STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108737902Trypsin-7-like; Belongs to the peptidase S1 family. (259 aa)    
Predicted Functional Partners:
LOC108735226
Twitchin.
    
 0.792
LOC108735688
Leucine-rich repeat serine/threonine-protein kinase 1 isoform X1.
    
 0.700
LOC108742364
Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1-like.
    
 0.634
LOC108732459
Contactin-associated protein like 5-1.
    
 0.591
LOC108733272
Collagen alpha-1(I) chain-like.
    
  0.542
LOC108737178
Triple functional domain protein-like isoform X1.
    
  0.542
LOC108743603
plexin-B-like.
    
  0.542
LOC108733526
CD109 antigen.
    
 0.473
LOC108736902
Polyhomeotic-proximal chromatin protein-like isoform X1.
    
 0.473
LOC108745032
CD109 antigen-like isoform X1.
    
 0.473
Your Current Organism:
Agrilus planipennis
NCBI taxonomy Id: 224129
Other names: A. planipennis, Agrilus feretrius, Agrilus marcopoli, emerald ash borer
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.