Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC108732627 | LOC108737621 | A0A1W4W4G6 | A0A1W4X0Z7 | Protein lin-54 homolog isoform X1. | Uncharacterized protein LOC108737621. | 0.624 |
LOC108732627 | LOC108741085 | A0A1W4W4G6 | A0A1W4X561 | Protein lin-54 homolog isoform X1. | Protein lin-9 homolog isoform X1. | 0.997 |
LOC108733694 | LOC108737531 | A0A1W4WJ37 | A0A1W4WZH1 | DNA repair endonuclease XPF. | Xylosyltransferase oxt isoform X1. | 0.989 |
LOC108733694 | LOC108737621 | A0A1W4WJ37 | A0A1W4X0Z7 | DNA repair endonuclease XPF. | Uncharacterized protein LOC108737621. | 0.572 |
LOC108733694 | LOC108742520 | A0A1W4WJ37 | A0A1W4XLB7 | DNA repair endonuclease XPF. | Deoxyuridine 5'-triphosphate nucleotidohydrolase, mitochondrial isoform X1. | 0.406 |
LOC108735688 | LOC108737531 | A0A1W4WRZ4 | A0A1W4WZH1 | Leucine-rich repeat serine/threonine-protein kinase 1 isoform X1. | Xylosyltransferase oxt isoform X1. | 0.855 |
LOC108735688 | LOC108737621 | A0A1W4WRZ4 | A0A1W4X0Z7 | Leucine-rich repeat serine/threonine-protein kinase 1 isoform X1. | Uncharacterized protein LOC108737621. | 0.575 |
LOC108737076 | LOC108737621 | A0A1W4WYL3 | A0A1W4X0Z7 | Mediator of RNA polymerase II transcription subunit 23 isoform X1. | Uncharacterized protein LOC108737621. | 0.578 |
LOC108737076 | LOC108738002 | A0A1W4WYL3 | A0A1W4WS26 | Mediator of RNA polymerase II transcription subunit 23 isoform X1. | Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.992 |
LOC108737076 | LOC108739230 | A0A1W4WYL3 | A0A1W4WXF0 | Mediator of RNA polymerase II transcription subunit 23 isoform X1. | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.997 |
LOC108737076 | LOC108745176 | A0A1W4WYL3 | A0A1W4XWI0 | Mediator of RNA polymerase II transcription subunit 23 isoform X1. | Mediator of RNA polymerase II transcription subunit 10; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.995 |
LOC108737531 | LOC108733694 | A0A1W4WZH1 | A0A1W4WJ37 | Xylosyltransferase oxt isoform X1. | DNA repair endonuclease XPF. | 0.989 |
LOC108737531 | LOC108735688 | A0A1W4WZH1 | A0A1W4WRZ4 | Xylosyltransferase oxt isoform X1. | Leucine-rich repeat serine/threonine-protein kinase 1 isoform X1. | 0.855 |
LOC108737531 | LOC108737621 | A0A1W4WZH1 | A0A1W4X0Z7 | Xylosyltransferase oxt isoform X1. | Uncharacterized protein LOC108737621. | 0.670 |
LOC108737531 | LOC108742520 | A0A1W4WZH1 | A0A1W4XLB7 | Xylosyltransferase oxt isoform X1. | Deoxyuridine 5'-triphosphate nucleotidohydrolase, mitochondrial isoform X1. | 0.990 |
LOC108737621 | LOC108732627 | A0A1W4X0Z7 | A0A1W4W4G6 | Uncharacterized protein LOC108737621. | Protein lin-54 homolog isoform X1. | 0.624 |
LOC108737621 | LOC108733694 | A0A1W4X0Z7 | A0A1W4WJ37 | Uncharacterized protein LOC108737621. | DNA repair endonuclease XPF. | 0.572 |
LOC108737621 | LOC108735688 | A0A1W4X0Z7 | A0A1W4WRZ4 | Uncharacterized protein LOC108737621. | Leucine-rich repeat serine/threonine-protein kinase 1 isoform X1. | 0.575 |
LOC108737621 | LOC108737076 | A0A1W4X0Z7 | A0A1W4WYL3 | Uncharacterized protein LOC108737621. | Mediator of RNA polymerase II transcription subunit 23 isoform X1. | 0.578 |
LOC108737621 | LOC108737531 | A0A1W4X0Z7 | A0A1W4WZH1 | Uncharacterized protein LOC108737621. | Xylosyltransferase oxt isoform X1. | 0.670 |
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