STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108741020Chromatin accessibility complex protein 1. (110 aa)    
Predicted Functional Partners:
LOC108734655
Nuclear transcription factor Y subunit alpha isoform X1.
    
 0.984
LOC108743939
Uncharacterized protein LOC108743939.
    
 
 0.770
LOC108742526
Lymphoid-specific helicase-like isoform X1.
    
 
 0.755
LOC108734519
Unconventional myosin-XVIIIa isoform X3; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 
 0.686
LOC108740679
GATA-binding factor A-like.
    
 
 0.674
LOC108743715
Nitrogen regulatory protein areA-like isoform X1.
    
 
 0.674
LOC108744567
Transcription factor GATA-3-like isoform X1.
    
 
 0.674
LOC108743620
Transcription factor GATA-4-like.
    
 
 0.674
LOC108743822
Cyclin-dependent kinase 2-like.
   
 0.629
LOC108732965
Uncharacterized protein LOC108732965.
    
 
 0.623
Your Current Organism:
Agrilus planipennis
NCBI taxonomy Id: 224129
Other names: A. planipennis, Agrilus feretrius, Agrilus marcopoli, emerald ash borer
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.