STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108742565U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (657 aa)    
Predicted Functional Partners:
LOC108733731
Bystin.
   
 
 0.999
LOC108737427
HEAT repeat-containing protein 1.
   
 0.999
LOC108739055
U3 small nucleolar ribonucleoprotein protein IMP3.
   
  0.999
LOC108737822
U3 small nucleolar RNA-associated protein 14 homolog B.
   
 
 0.999
LOC108738329
WD repeat-containing protein 43.
   
 0.999
LOC108741053
Nucleolar protein 58.
   
 0.999
LOC108741560
WD repeat-containing protein 3.
   
 
 0.999
LOC108744416
Nucleolar protein 14 homolog isoform X1.
   
 
 0.999
LOC108743086
WD repeat-containing protein 36.
   
 
 0.999
LOC108732491
Nucleolar protein 56.
   
 0.998
Your Current Organism:
Agrilus planipennis
NCBI taxonomy Id: 224129
Other names: A. planipennis, Agrilus feretrius, Agrilus marcopoli, emerald ash borer
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.