Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC108732249 | LOC108732587 | A0A1W4WDB1 | A0A1W4W479 | 50S ribosomal protein L1 isoform X1. | 40S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family. | 0.984 |
LOC108732249 | LOC108732630 | A0A1W4WDB1 | A0A1W4W4H1 | 50S ribosomal protein L1 isoform X1. | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.998 |
LOC108732249 | LOC108732770 | A0A1W4WDB1 | A0A1W4W529 | 50S ribosomal protein L1 isoform X1. | 40S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. | 0.988 |
LOC108732249 | LOC108732839 | A0A1W4WDB1 | A0A1W4W5C7 | 50S ribosomal protein L1 isoform X1. | 39S ribosomal protein L32, mitochondrial. | 0.996 |
LOC108732249 | LOC108733072 | A0A1W4WDB1 | A0A1W4W667 | 50S ribosomal protein L1 isoform X1. | 40S ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family. | 0.997 |
LOC108732249 | LOC108734025 | A0A1W4WDB1 | A0A1W4WA69 | 50S ribosomal protein L1 isoform X1. | Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. | 0.997 |
LOC108732249 | LOC108734161 | A0A1W4WDB1 | A0A1W4WAS3 | 50S ribosomal protein L1 isoform X1. | 40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. | 0.996 |
LOC108732249 | LOC108734664 | A0A1W4WDB1 | A0A1W4WCW2 | 50S ribosomal protein L1 isoform X1. | Proteoglycan Cow. | 0.985 |
LOC108732249 | LOC108740383 | A0A1W4WDB1 | A0A1W4XBI9 | 50S ribosomal protein L1 isoform X1. | 60S ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family. | 0.999 |
LOC108732249 | LOC108745249 | A0A1W4WDB1 | A0A1W4W2L8 | 50S ribosomal protein L1 isoform X1. | 39S ribosomal protein L19, mitochondrial isoform X1. | 0.999 |
LOC108732587 | LOC108732249 | A0A1W4W479 | A0A1W4WDB1 | 40S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family. | 50S ribosomal protein L1 isoform X1. | 0.984 |
LOC108732587 | LOC108732630 | A0A1W4W479 | A0A1W4W4H1 | 40S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family. | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.999 |
LOC108732587 | LOC108732770 | A0A1W4W479 | A0A1W4W529 | 40S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family. | 40S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. | 0.999 |
LOC108732587 | LOC108732839 | A0A1W4W479 | A0A1W4W5C7 | 40S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family. | 39S ribosomal protein L32, mitochondrial. | 0.996 |
LOC108732587 | LOC108733072 | A0A1W4W479 | A0A1W4W667 | 40S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family. | 40S ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family. | 0.999 |
LOC108732587 | LOC108734025 | A0A1W4W479 | A0A1W4WA69 | 40S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family. | Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. | 0.999 |
LOC108732587 | LOC108734161 | A0A1W4W479 | A0A1W4WAS3 | 40S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family. | 40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. | 0.999 |
LOC108732587 | LOC108734664 | A0A1W4W479 | A0A1W4WCW2 | 40S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family. | Proteoglycan Cow. | 0.999 |
LOC108732587 | LOC108740383 | A0A1W4W479 | A0A1W4XBI9 | 40S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family. | 60S ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family. | 0.999 |
LOC108732587 | LOC108745249 | A0A1W4W479 | A0A1W4W2L8 | 40S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family. | 39S ribosomal protein L19, mitochondrial isoform X1. | 0.998 |
page 1 of 6