STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108740072Uncharacterized protein LOC108740072. (504 aa)    
Predicted Functional Partners:
LOC108732838
SUMO-conjugating enzyme UBC9-B; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.988
LOC108744571
MOB kinase activator-like 4.
    
 
 0.986
LOC108737992
Zinc finger protein 330 homolog.
    
   0.984
LOC108744009
pre-mRNA-splicing factor ISY1 homolog.
    
   0.984
LOC108743896
RRP15-like protein.
    
   0.984
LOC108738467
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
    
 
 0.978
LOC108741011
Death-associated inhibitor of apoptosis 2.
    
 
 0.774
LOC108741003
Death-associated inhibitor of apoptosis 1.
    
 
 0.774
LOC108735608
Aurora kinase C-like; Belongs to the protein kinase superfamily.
    
 
 0.718
LOC108744036
Aurora kinase C-like; Belongs to the protein kinase superfamily.
    
 
 0.718
Your Current Organism:
Agrilus planipennis
NCBI taxonomy Id: 224129
Other names: A. planipennis, Agrilus feretrius, Agrilus marcopoli, emerald ash borer
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