STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108743324Polypeptide N-acetylgalactosaminyltransferase. (581 aa)    
Predicted Functional Partners:
LOC108732611
glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like.
     
 0.900
LOC108736452
glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like.
     
 0.900
LOC108736676
Polypeptide N-acetylgalactosaminyltransferase.
  
0.657
LOC108737401
Hexosyltransferase.
    
 0.591
LOC108741514
Polypeptide N-acetylgalactosaminyltransferase.
  
  
0.544
LOC108734788
Ras-related protein Rab-18-like.
     
 0.526
LOC108732711
Nucleoplasmin-like protein isoform X1.
     
 0.521
LOC108733792
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
     
 0.521
LOC108732895
Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes.
     
 0.519
LOC108733591
Dynactin subunit 2.
     
 0.519
Your Current Organism:
Agrilus planipennis
NCBI taxonomy Id: 224129
Other names: A. planipennis, Agrilus feretrius, Agrilus marcopoli, emerald ash borer
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.