STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108740996Transcriptional adapter 1-like. (282 aa)    
Predicted Functional Partners:
LOC108743377
Transcription initiation factor TFIID subunit 12 isoform X1.
    
 0.994
LOC108736355
Transcription initiation protein SPT3 homolog.
    
 
 0.993
LOC108739830
Transcription initiation factor TFIID subunit 10-like.
    
 
 0.992
LOC108733664
Transcription initiation factor TFIID subunit 9.
   
 
 0.991
LOC108738222
SAGA-associated factor 11; Component of the transcription regulatory histone acetylation (HAT) complex SAGA, a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates in a subcomplex that specifically deubiquitinates histone H2B. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription.
    
 0.991
LOC108739472
SAGA-associated factor 29 isoform X1.
    
 0.991
LOC108743149
Transcriptional adapter.
    
 0.991
LOC108741830
Transcriptional adapter 3-A isoform X1.
    
 
 0.989
LOC108735297
Flocculation protein FLO11-like isoform X1.
    
 
 0.985
LOC108739915
Ubiquitin carboxyl-terminal hydrolase.
    
   0.984
Your Current Organism:
Agrilus planipennis
NCBI taxonomy Id: 224129
Other names: A. planipennis, Agrilus feretrius, Agrilus marcopoli, emerald ash borer
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.