STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108741447Achaete-scute complex protein T3-like. (273 aa)    
Predicted Functional Partners:
LOC108743557
Transcription factor 4-like.
   
 0.979
LOC108742655
LIM domain-binding protein 2.
    
 0.758
LOC108743442
Protein hairy.
   
 
 0.736
LOC108737729
DNA-binding protein inhibitor ID-2.
    
 0.711
LOC108740679
GATA-binding factor A-like.
   
 0.650
LOC108743715
Nitrogen regulatory protein areA-like isoform X1.
   
 0.650
LOC108744567
Transcription factor GATA-3-like isoform X1.
   
 0.650
LOC108743620
Transcription factor GATA-4-like.
   
 0.650
LOC108739533
LIM domain only protein 3-like isoform X1.
    
 0.611
LOC108740409
LIM domain only protein 3-like isoform X1.
    
 0.611
Your Current Organism:
Agrilus planipennis
NCBI taxonomy Id: 224129
Other names: A. planipennis, Agrilus feretrius, Agrilus marcopoli, emerald ash borer
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.