STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108741513Heterogeneous nuclear ribonucleoprotein L. (319 aa)    
Predicted Functional Partners:
LOC108732838
SUMO-conjugating enzyme UBC9-B; Belongs to the ubiquitin-conjugating enzyme family.
    
   0.986
LOC108735327
Heterogeneous nuclear ribonucleoprotein K-like isoform X1.
   
 0.928
LOC108737201
RING finger and SPRY domain-containing protein 1-like.
   
 0.879
LOC108743441
RNA-binding protein cabeza-like isoform X1.
   
 0.866
LOC108741239
poly(RC)-binding protein 3 isoform X6.
   
 0.851
LOC108738988
Heterogeneous nuclear ribonucleoprotein H-like isoform X1.
   
 0.827
LOC108742829
Serine/arginine-rich splicing factor 1B.
   
 0.813
LOC108740536
Serine-arginine protein 55-like isoform X1.
   
 0.812
LOC108732872
Probable histone-lysine N-methyltransferase CG1716.
    
   0.801
LOC108737685
Transformer-2 protein homolog beta isoform X1.
   
 0.801
Your Current Organism:
Agrilus planipennis
NCBI taxonomy Id: 224129
Other names: A. planipennis, Agrilus feretrius, Agrilus marcopoli, emerald ash borer
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.