STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108742957Peptidyl-prolyl cis-trans isomerase E; Catalyzes the cis-trans isomerization of proline imidic peptide bonds in proteins; Belongs to the cyclophilin-type PPIase family. PPIase E subfamily. (303 aa)    
Predicted Functional Partners:
LOC108733120
pre-mRNA-processing factor 19.
    
 0.999
LOC108742188
pre-mRNA-splicing factor SYF1.
   
 0.999
LOC108743154
Intron-binding protein aquarius-like.
    
 0.997
LOC108738591
Puff-specific protein Bx42.
   
 0.996
LOC108741344
Protein BUD31 homolog.
   
 0.996
LOC108744009
pre-mRNA-splicing factor ISY1 homolog.
   
  0.995
LOC108740334
Zinc finger protein 830.
    
 0.987
LOC108733565
Probable replication factor C subunit 1.
   
 0.985
LOC108736435
Intron-binding protein aquarius.
    
 0.980
LOC108742788
pre-mRNA-splicing factor Syf2.
 
  
 0.975
Your Current Organism:
Agrilus planipennis
NCBI taxonomy Id: 224129
Other names: A. planipennis, Agrilus feretrius, Agrilus marcopoli, emerald ash borer
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.