STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108743725LIX1-like protein. (180 aa)    
Predicted Functional Partners:
LOC108745033
Uncharacterized protein DDB_G0283697-like.
   
    0.893
LOC108738014
Cadherin-related tumor suppressor-like.
   
 0.848
LOC108735960
Calcium-activated chloride channel regulator 4-like isoform X2.
   
    0.832
LOC108744917
UPF0489 protein C5orf22 homolog.
   
 0.806
LOC108743475
SH2 domain-containing adapter protein E isoform X1.
   
    0.744
LOC108736748
GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase.
   
    0.741
LOC108734026
Protein dachsous.
    
 0.640
LOC108737882
cadherin-89D.
    
 0.596
LOC108738184
DE-cadherin; Cadherins are calcium-dependent cell adhesion proteins.
    
 0.596
LOC108734296
Protocadherin Fat 4-like isoform X1.
    
 0.578
Your Current Organism:
Agrilus planipennis
NCBI taxonomy Id: 224129
Other names: A. planipennis, Agrilus feretrius, Agrilus marcopoli, emerald ash borer
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.