Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ybdM | ybdN | BSU02030 | BSU02040 | Probable serine/threonine-protein kinase YbdM; Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe: putative enzyme; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family | Uncharacterized protein YbdN; Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type h : extrachromosomal origin | 0.600 |
ybdM | ybdO | BSU02030 | BSU02050 | Probable serine/threonine-protein kinase YbdM; Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe: putative enzyme; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family | Uncharacterized protein YbdO; Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type h : extrachromosomal origin | 0.427 |
ybdN | ybdM | BSU02040 | BSU02030 | Uncharacterized protein YbdN; Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type h : extrachromosomal origin | Probable serine/threonine-protein kinase YbdM; Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe: putative enzyme; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family | 0.600 |
ybdN | ybdO | BSU02040 | BSU02050 | Uncharacterized protein YbdN; Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type h : extrachromosomal origin | Uncharacterized protein YbdO; Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type h : extrachromosomal origin | 0.608 |
ybdO | ybdM | BSU02050 | BSU02030 | Uncharacterized protein YbdO; Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type h : extrachromosomal origin | Probable serine/threonine-protein kinase YbdM; Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe: putative enzyme; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family | 0.427 |
ybdO | ybdN | BSU02050 | BSU02040 | Uncharacterized protein YbdO; Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type h : extrachromosomal origin | Uncharacterized protein YbdN; Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type h : extrachromosomal origin | 0.608 |