STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ydaGGeneral stress protein 26; Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pf : putative factor (140 aa)    
Predicted Functional Partners:
ydaE
Conserved hypothetical protein; Belongs to the D-lyxose ketol-isomerase family
     
 0.945
ydaD
General stress protein 39; Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe: putative enzyme
     
 0.870
yfkM
General stress protein 18; Functions in the protection against aldehyde-stress, possibly by degrading damaged proteins
  
  
 0.804
yocK
General stress protein 16O; Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pf : putative factor
     
 0.735
bmrU
Putative lipid kinase bmru; May catalyze the ATP-dependent phosphorylation of lipids other than diacylglycerol (DAG). In fact, is not able to exhibit diacylglycerol kinase activity in vitro
      
 0.729
ycdF
Putative glucose 1-dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family
      
 0.713
ydbA
Conserved hypothetical protein; Uncharacterized protein YdbA; Evidence 4: Homologs of previously reported genes of unknown function
      
 0.711
yflT
General stress protein 17M; Evidence 1a: Function experimentally demonstrated in the studied strain; Product type f: factor
  
     0.662
ydaP
Putative thiamine pyrophosphate-containing protein YdaP; Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe: putative enzyme
  
   
 0.644
ydaF
Putative N-acetyltransferase. May act on ribosomal proteins (Potential)
       0.637
Your Current Organism:
Bacillus subtilis
NCBI taxonomy Id: 224308
Other names: B. subtilis subsp. subtilis str. 168, Bacillus subtilis 168, Bacillus subtilis subsp. subtilis 168, Bacillus subtilis subsp. subtilis str. 168, Bacillus subtilis subsp. subtilis str. BGSC 1A700
Server load: low (8%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.