Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| catD | ydfN | BSU08230 | BSU05480 | Catechol-2,3-dioxygenase membrane subunit; Essential for growth and viability in the presence of catechol and probably involved in the detoxification of catechol. | Putative oxidoreductase; Putative nitroreductase that may contribute to the degradation of aromatic compounds. | 0.509 |
| catD | ydfP | BSU08230 | BSU05500 | Catechol-2,3-dioxygenase membrane subunit; Essential for growth and viability in the presence of catechol and probably involved in the detoxification of catechol. | Putative membrane bound oxidoreductase; Putative oxidoreductase that may contribute to the degradation of aromatic compounds. | 0.756 |
| sigB | ydfP | BSU04730 | BSU05500 | RNA polymerase sigma-37 factor (sigma(B)); Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. Sigma B is not essential for sporulation; rather it is required for maximal expression of ctc and csbA which are transcribed in the early stationary phase under conditions inimical to sporulation. May play a role in the ability of the bacterium to adapt to various stresses but is not essential for its survival under these conditions. Positively regulates expression of its own operon; Belongs to the sigma-70 fac [...] | Putative membrane bound oxidoreductase; Putative oxidoreductase that may contribute to the degradation of aromatic compounds. | 0.631 |
| ydfN | catD | BSU05480 | BSU08230 | Putative oxidoreductase; Putative nitroreductase that may contribute to the degradation of aromatic compounds. | Catechol-2,3-dioxygenase membrane subunit; Essential for growth and viability in the presence of catechol and probably involved in the detoxification of catechol. | 0.509 |
| ydfN | ydfO | BSU05480 | BSU05490 | Putative oxidoreductase; Putative nitroreductase that may contribute to the degradation of aromatic compounds. | Putative dioxygenase; Putative ring-cleavage dioxygenase that may contribute to the degradation of aromatic compounds. | 0.993 |
| ydfN | ydfP | BSU05480 | BSU05500 | Putative oxidoreductase; Putative nitroreductase that may contribute to the degradation of aromatic compounds. | Putative membrane bound oxidoreductase; Putative oxidoreductase that may contribute to the degradation of aromatic compounds. | 0.641 |
| ydfO | ydfN | BSU05490 | BSU05480 | Putative dioxygenase; Putative ring-cleavage dioxygenase that may contribute to the degradation of aromatic compounds. | Putative oxidoreductase; Putative nitroreductase that may contribute to the degradation of aromatic compounds. | 0.993 |
| ydfO | ydfP | BSU05490 | BSU05500 | Putative dioxygenase; Putative ring-cleavage dioxygenase that may contribute to the degradation of aromatic compounds. | Putative membrane bound oxidoreductase; Putative oxidoreductase that may contribute to the degradation of aromatic compounds. | 0.681 |
| ydfP | catD | BSU05500 | BSU08230 | Putative membrane bound oxidoreductase; Putative oxidoreductase that may contribute to the degradation of aromatic compounds. | Catechol-2,3-dioxygenase membrane subunit; Essential for growth and viability in the presence of catechol and probably involved in the detoxification of catechol. | 0.756 |
| ydfP | sigB | BSU05500 | BSU04730 | Putative membrane bound oxidoreductase; Putative oxidoreductase that may contribute to the degradation of aromatic compounds. | RNA polymerase sigma-37 factor (sigma(B)); Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. Sigma B is not essential for sporulation; rather it is required for maximal expression of ctc and csbA which are transcribed in the early stationary phase under conditions inimical to sporulation. May play a role in the ability of the bacterium to adapt to various stresses but is not essential for its survival under these conditions. Positively regulates expression of its own operon; Belongs to the sigma-70 fac [...] | 0.631 |
| ydfP | ydfN | BSU05500 | BSU05480 | Putative membrane bound oxidoreductase; Putative oxidoreductase that may contribute to the degradation of aromatic compounds. | Putative oxidoreductase; Putative nitroreductase that may contribute to the degradation of aromatic compounds. | 0.641 |
| ydfP | ydfO | BSU05500 | BSU05490 | Putative membrane bound oxidoreductase; Putative oxidoreductase that may contribute to the degradation of aromatic compounds. | Putative dioxygenase; Putative ring-cleavage dioxygenase that may contribute to the degradation of aromatic compounds. | 0.681 |
| ydfP | ydfQ | BSU05500 | BSU05510 | Putative membrane bound oxidoreductase; Putative oxidoreductase that may contribute to the degradation of aromatic compounds. | Putative thioredoxin or thiol-disulfide isomerase; Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | 0.468 |
| ydfP | ywnB | BSU05500 | BSU36620 | Putative membrane bound oxidoreductase; Putative oxidoreductase that may contribute to the degradation of aromatic compounds. | Putative oxidoreductase; Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe: putative enzyme. | 0.556 |
| ydfQ | ydfP | BSU05510 | BSU05500 | Putative thioredoxin or thiol-disulfide isomerase; Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Putative membrane bound oxidoreductase; Putative oxidoreductase that may contribute to the degradation of aromatic compounds. | 0.468 |
| ywnB | ydfP | BSU36620 | BSU05500 | Putative oxidoreductase; Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe: putative enzyme. | Putative membrane bound oxidoreductase; Putative oxidoreductase that may contribute to the degradation of aromatic compounds. | 0.556 |