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ydhI protein (Bacillus subtilis) - STRING interaction network
"ydhI" - Uncharacterized protein YdhI in Bacillus subtilis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ydhIUncharacterized protein YdhI; Evidence 3- Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe- putative enzyme (160 aa)    
Predicted Functional Partners:
ydhH
Uncharacterized protein YdhH; Evidence 4- Homologs of previously reported genes of unknown function (165 aa)
              0.806
ydhJ
Uncharacterized protein YdhJ; Evidence 3- Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe- putative enzyme (325 aa)
   
        0.612
wprA
Cell wall-associated protease; CWBP52 is a serine-type protease that could be involved in proteoglycan peptide bridges; Belongs to the peptidase S8 family (894 aa)
     
      0.443
Your Current Organism:
Bacillus subtilis
NCBI taxonomy Id: 224308
Other names: B. subtilis subsp. subtilis str. 168, Bacillus subtilis, Bacillus subtilis 168, Bacillus subtilis subsp. subtilis 168, Bacillus subtilis subsp. subtilis str. 168, Bacillus subtilis subsp. subtilis str. BGSC 1A700
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