Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| gltA | narG | BSU18450 | BSU37280 | Glutamate synthase (nadph) large chain; Belongs to the glutamate synthase family | Nitrate reductase / nitrite oxidoreductase, alpha subunit; The alpha chain is the actual site of nitrate reduction | 0.591 |
| gltA | narJ | BSU18450 | BSU37260 | Glutamate synthase (nadph) large chain; Belongs to the glutamate synthase family | Chaperone required for proper molybdenum cofactor insertion and final assembly of the membrane-bound respiratory nitrate reductase | 0.591 |
| gltA | nasE | BSU18450 | BSU03290 | Glutamate synthase (nadph) large chain; Belongs to the glutamate synthase family | Assimilatory nitrite reductase [nad(p)h] small subunit; Required for nitrite assimilation. Required for activity of the reductase (By similarity) | 0.654 |
| gltA | yfnC | BSU18450 | BSU07320 | Glutamate synthase (nadph) large chain; Belongs to the glutamate synthase family | Mfs transporter, fsr family, fosmidomycin resistance protein; Uncharacterized MFS-type transporter YfnC; Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pt: putative transporter | 0.582 |
| hmp | narG | BSU13040 | BSU37280 | Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress (By similarity) | Nitrate reductase / nitrite oxidoreductase, alpha subunit; The alpha chain is the actual site of nitrate reduction | 0.822 |
| hmp | narH | BSU13040 | BSU37270 | Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress (By similarity) | Nitrate reductase / nitrite oxidoreductase, beta subunit; The beta chain is an electron transfer unit containing four cysteine clusters involved in the formation of iron-sulfur centers. Electrons are transferred from the gamma chain to the molybdenum cofactor of the alpha subunit | 0.686 |
| hmp | narJ | BSU13040 | BSU37260 | Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress (By similarity) | Chaperone required for proper molybdenum cofactor insertion and final assembly of the membrane-bound respiratory nitrate reductase | 0.727 |
| hmp | nasE | BSU13040 | BSU03290 | Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress (By similarity) | Assimilatory nitrite reductase [nad(p)h] small subunit; Required for nitrite assimilation. Required for activity of the reductase (By similarity) | 0.536 |
| hmp | nasF | BSU13040 | BSU03280 | Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress (By similarity) | Uroporphyrinogen iii methyltransferase / synthase; Belongs to the precorrin methyltransferase family | 0.505 |
| hmp | yfnC | BSU13040 | BSU07320 | Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress (By similarity) | Mfs transporter, fsr family, fosmidomycin resistance protein; Uncharacterized MFS-type transporter YfnC; Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pt: putative transporter | 0.634 |
| narG | gltA | BSU37280 | BSU18450 | Nitrate reductase / nitrite oxidoreductase, alpha subunit; The alpha chain is the actual site of nitrate reduction | Glutamate synthase (nadph) large chain; Belongs to the glutamate synthase family | 0.591 |
| narG | hmp | BSU37280 | BSU13040 | Nitrate reductase / nitrite oxidoreductase, alpha subunit; The alpha chain is the actual site of nitrate reduction | Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress (By similarity) | 0.822 |
| narG | narH | BSU37280 | BSU37270 | Nitrate reductase / nitrite oxidoreductase, alpha subunit; The alpha chain is the actual site of nitrate reduction | Nitrate reductase / nitrite oxidoreductase, beta subunit; The beta chain is an electron transfer unit containing four cysteine clusters involved in the formation of iron-sulfur centers. Electrons are transferred from the gamma chain to the molybdenum cofactor of the alpha subunit | 0.999 |
| narG | narJ | BSU37280 | BSU37260 | Nitrate reductase / nitrite oxidoreductase, alpha subunit; The alpha chain is the actual site of nitrate reduction | Chaperone required for proper molybdenum cofactor insertion and final assembly of the membrane-bound respiratory nitrate reductase | 0.999 |
| narG | nasE | BSU37280 | BSU03290 | Nitrate reductase / nitrite oxidoreductase, alpha subunit; The alpha chain is the actual site of nitrate reduction | Assimilatory nitrite reductase [nad(p)h] small subunit; Required for nitrite assimilation. Required for activity of the reductase (By similarity) | 0.993 |
| narG | yfnC | BSU37280 | BSU07320 | Nitrate reductase / nitrite oxidoreductase, alpha subunit; The alpha chain is the actual site of nitrate reduction | Mfs transporter, fsr family, fosmidomycin resistance protein; Uncharacterized MFS-type transporter YfnC; Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pt: putative transporter | 0.456 |
| narH | hmp | BSU37270 | BSU13040 | Nitrate reductase / nitrite oxidoreductase, beta subunit; The beta chain is an electron transfer unit containing four cysteine clusters involved in the formation of iron-sulfur centers. Electrons are transferred from the gamma chain to the molybdenum cofactor of the alpha subunit | Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress (By similarity) | 0.686 |
| narH | narG | BSU37270 | BSU37280 | Nitrate reductase / nitrite oxidoreductase, beta subunit; The beta chain is an electron transfer unit containing four cysteine clusters involved in the formation of iron-sulfur centers. Electrons are transferred from the gamma chain to the molybdenum cofactor of the alpha subunit | Nitrate reductase / nitrite oxidoreductase, alpha subunit; The alpha chain is the actual site of nitrate reduction | 0.999 |
| narH | narJ | BSU37270 | BSU37260 | Nitrate reductase / nitrite oxidoreductase, beta subunit; The beta chain is an electron transfer unit containing four cysteine clusters involved in the formation of iron-sulfur centers. Electrons are transferred from the gamma chain to the molybdenum cofactor of the alpha subunit | Chaperone required for proper molybdenum cofactor insertion and final assembly of the membrane-bound respiratory nitrate reductase | 0.999 |
| narH | nasE | BSU37270 | BSU03290 | Nitrate reductase / nitrite oxidoreductase, beta subunit; The beta chain is an electron transfer unit containing four cysteine clusters involved in the formation of iron-sulfur centers. Electrons are transferred from the gamma chain to the molybdenum cofactor of the alpha subunit | Assimilatory nitrite reductase [nad(p)h] small subunit; Required for nitrite assimilation. Required for activity of the reductase (By similarity) | 0.995 |
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