Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ltaSB | yflA | BSU07710 | BSU07750 | Enzyme responsible for polyglycerolphosphate LTA synthesis; Catalyzes the polymerization of lipoteichoic acid (LTA) polyglycerol phosphate, a reaction that presumably uses phosphatidylglycerol (PG) as substrate; Belongs to the LTA synthase family. | Putative aminoacid transporter; Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pt: putative transporter. | 0.491 |
ltaSB | yflB | BSU07710 | BSU07735 | Enzyme responsible for polyglycerolphosphate LTA synthesis; Catalyzes the polymerization of lipoteichoic acid (LTA) polyglycerol phosphate, a reaction that presumably uses phosphatidylglycerol (PG) as substrate; Belongs to the LTA synthase family. | Conserved hypothetical protein; Evidence 4: Homologs of previously reported genes of unknown function. | 0.509 |
ltaSB | yflD | BSU07710 | BSU07720 | Enzyme responsible for polyglycerolphosphate LTA synthesis; Catalyzes the polymerization of lipoteichoic acid (LTA) polyglycerol phosphate, a reaction that presumably uses phosphatidylglycerol (PG) as substrate; Belongs to the LTA synthase family. | Hypothetical protein; Evidence 5: No homology to any previously reported sequences. | 0.545 |
yflA | ltaSB | BSU07750 | BSU07710 | Putative aminoacid transporter; Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pt: putative transporter. | Enzyme responsible for polyglycerolphosphate LTA synthesis; Catalyzes the polymerization of lipoteichoic acid (LTA) polyglycerol phosphate, a reaction that presumably uses phosphatidylglycerol (PG) as substrate; Belongs to the LTA synthase family. | 0.491 |
yflA | yflB | BSU07750 | BSU07735 | Putative aminoacid transporter; Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pt: putative transporter. | Conserved hypothetical protein; Evidence 4: Homologs of previously reported genes of unknown function. | 0.505 |
yflA | yflD | BSU07750 | BSU07720 | Putative aminoacid transporter; Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pt: putative transporter. | Hypothetical protein; Evidence 5: No homology to any previously reported sequences. | 0.561 |
yflB | ltaSB | BSU07735 | BSU07710 | Conserved hypothetical protein; Evidence 4: Homologs of previously reported genes of unknown function. | Enzyme responsible for polyglycerolphosphate LTA synthesis; Catalyzes the polymerization of lipoteichoic acid (LTA) polyglycerol phosphate, a reaction that presumably uses phosphatidylglycerol (PG) as substrate; Belongs to the LTA synthase family. | 0.509 |
yflB | yflA | BSU07735 | BSU07750 | Conserved hypothetical protein; Evidence 4: Homologs of previously reported genes of unknown function. | Putative aminoacid transporter; Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pt: putative transporter. | 0.505 |
yflB | yflD | BSU07735 | BSU07720 | Conserved hypothetical protein; Evidence 4: Homologs of previously reported genes of unknown function. | Hypothetical protein; Evidence 5: No homology to any previously reported sequences. | 0.739 |
yflD | ltaSB | BSU07720 | BSU07710 | Hypothetical protein; Evidence 5: No homology to any previously reported sequences. | Enzyme responsible for polyglycerolphosphate LTA synthesis; Catalyzes the polymerization of lipoteichoic acid (LTA) polyglycerol phosphate, a reaction that presumably uses phosphatidylglycerol (PG) as substrate; Belongs to the LTA synthase family. | 0.545 |
yflD | yflA | BSU07720 | BSU07750 | Hypothetical protein; Evidence 5: No homology to any previously reported sequences. | Putative aminoacid transporter; Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pt: putative transporter. | 0.561 |
yflD | yflB | BSU07720 | BSU07735 | Hypothetical protein; Evidence 5: No homology to any previously reported sequences. | Conserved hypothetical protein; Evidence 4: Homologs of previously reported genes of unknown function. | 0.739 |