STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sspKSmall acid-soluble spore protein k (minor); Belongs to the SspK family (50 aa)    
Predicted Functional Partners:
sspP
Small acid-soluble spore protein p (minor); Belongs to the SspP family
  
   
 0.968
sspO
Small acid-soluble spore protein o (minor); Belongs to the SspO family
  
   
 0.961
sspM
Small, acid-soluble spore protein M; Evidence 1a: Function experimentally demonstrated in the studied strain; Product type cp: cell process
      
 0.888
yhcU
Hypothetical protein; Uncharacterized protein YhcU; Evidence 5: No homology to any previously reported sequences
  
     0.773
ylzJ
Conserved hypothetical protein; Uncharacterized protein YlzJ; Evidence 4: Homologs of previously reported genes of unknown function
  
     0.762
ypbF
Conserved hypothetical protein; Uncharacterized protein YpbF; Evidence 4: Homologs of previously reported genes of unknown function
  
     0.759
ytzC
Conserved hypothetical protein; Uncharacterized protein YtzC; Evidence 4: Homologs of previously reported genes of unknown function
  
     0.743
sspI
Small acid-soluble spore protein i (minor); Belongs to the SspI family
      
 0.728
yfhD
Conserved hypothetical protein; Uncharacterized protein YfhD; Evidence 4: Homologs of previously reported genes of unknown function
  
     0.718
yqxA
Conserved hypothetical protein; Uncharacterized protein YqxA; Evidence 4: Homologs of previously reported genes of unknown function
  
     0.712
Your Current Organism:
Bacillus subtilis
NCBI taxonomy Id: 224308
Other names: B. subtilis subsp. subtilis str. 168, Bacillus subtilis 168, Bacillus subtilis subsp. subtilis 168, Bacillus subtilis subsp. subtilis str. 168, Bacillus subtilis subsp. subtilis str. BGSC 1A700
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.