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hinT protein (Bacillus subtilis) - STRING interaction network
"hinT" - Protein hit in Bacillus subtilis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hinTProtein hit; Evidence 2a- Function of homologous gene experimentally demonstrated in an other organism; Product type e - enzyme (145 aa)    
Predicted Functional Partners:
yopT
SPBc2 prophage-derived uncharacterized protein YopT; Evidence 5- No homology to any previously reported sequences (72 aa)
           
  0.854
yqxC
Putative rRNA methyltransferase YqxC; Evidence 3- Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe - putative enzyme; Belongs to the TlyA family (281 aa)
          0.799
ybgF
Uncharacterized amino acid permease YbgF; Evidence 3- Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pt- putative transporter (470 aa)
           
  0.791
yebC
Uncharacterized protein YebC; Evidence 3- Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pm- putative membrane component (267 aa)
         
  0.765
recU
Holliday junction resolvase RecU; Has at least 2 separable functions; Holliday junction resolution with generation of monomeric chromosomes, and modulation of RecA activity. Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation. Partially inhibits the hydrolysis of dATP or rATP by RecA. Holliday junction resolution is stimulated by Ruv [...] (206 aa)
   
     
  0.685
serC
Phosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily (359 aa)
   
        0.648
rplGA
Probable ribosomal protein YlxQ; RNA-binding protein that recognizes the K-turn motif present in ribosomal RNA, but also in box C/D and box C’/D’ sRNAs (100 aa)
 
   
  0.603
ylxR
Uncharacterized protein YlxR; Evidence 3- Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pf- putative factor (91 aa)
         
  0.568
pksM
Polyketide synthase PksM; Involved in some intermediate steps for the synthesis of the antibiotic polyketide bacillaene which is involved in secondary metabolism (4262 aa)
   
 
  0.540
ytmP
Putative phosphotransferase YtmP; Evidence 3- Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe- putative enzyme; Belongs to the aminoglycoside phosphotransferase family (204 aa)
 
   
  0.537
Your Current Organism:
Bacillus subtilis
NCBI taxonomy Id: 224308
Other names: B. subtilis subsp. subtilis str. 168, Bacillus subtilis, Bacillus subtilis 168, Bacillus subtilis subsp. subtilis 168, Bacillus subtilis subsp. subtilis str. 168, Bacillus subtilis subsp. subtilis str. BGSC 1A700
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