Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
yjcN | yjcO | BSU11920 | BSU11930 | Conserved hypothetical protein; Evidence 4: Homologs of previously reported genes of unknown function. | Putative DNA binding protein; Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pr: putative regulator. | 0.560 |
yjcN | yjzF | BSU11920 | BSU11928 | Conserved hypothetical protein; Evidence 4: Homologs of previously reported genes of unknown function. | Hypothetical protein; Evidence 5: No homology to any previously reported sequences. | 0.485 |
yjcN | yjzG | BSU11920 | BSU11929 | Conserved hypothetical protein; Evidence 4: Homologs of previously reported genes of unknown function. | Hypothetical protein; Evidence 5: No homology to any previously reported sequences. | 0.455 |
yjcO | yjcN | BSU11930 | BSU11920 | Putative DNA binding protein; Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pr: putative regulator. | Conserved hypothetical protein; Evidence 4: Homologs of previously reported genes of unknown function. | 0.560 |
yjcO | yjzF | BSU11930 | BSU11928 | Putative DNA binding protein; Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pr: putative regulator. | Hypothetical protein; Evidence 5: No homology to any previously reported sequences. | 0.715 |
yjcO | yjzG | BSU11930 | BSU11929 | Putative DNA binding protein; Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pr: putative regulator. | Hypothetical protein; Evidence 5: No homology to any previously reported sequences. | 0.818 |
yjzF | yjcN | BSU11928 | BSU11920 | Hypothetical protein; Evidence 5: No homology to any previously reported sequences. | Conserved hypothetical protein; Evidence 4: Homologs of previously reported genes of unknown function. | 0.485 |
yjzF | yjcO | BSU11928 | BSU11930 | Hypothetical protein; Evidence 5: No homology to any previously reported sequences. | Putative DNA binding protein; Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pr: putative regulator. | 0.715 |
yjzF | yjzG | BSU11928 | BSU11929 | Hypothetical protein; Evidence 5: No homology to any previously reported sequences. | Hypothetical protein; Evidence 5: No homology to any previously reported sequences. | 0.909 |
yjzG | yjcN | BSU11929 | BSU11920 | Hypothetical protein; Evidence 5: No homology to any previously reported sequences. | Conserved hypothetical protein; Evidence 4: Homologs of previously reported genes of unknown function. | 0.455 |
yjzG | yjcO | BSU11929 | BSU11930 | Hypothetical protein; Evidence 5: No homology to any previously reported sequences. | Putative DNA binding protein; Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pr: putative regulator. | 0.818 |
yjzG | yjzF | BSU11929 | BSU11928 | Hypothetical protein; Evidence 5: No homology to any previously reported sequences. | Hypothetical protein; Evidence 5: No homology to any previously reported sequences. | 0.909 |