STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yjmDUncharacterized zinc-type alcohol dehydrogenase-like protein YjmD; Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe: putative enzyme (339 aa)    
Predicted Functional Partners:
yjmC
Uncharacterized oxidoreductase YjmC; Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe: putative enzyme
 
  
 0.903
uxuA
D-mannonate dehydratase; Catalyzes the dehydration of D-mannonate
 
   
 0.901
uxuB
Fructuronate reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family
 
 
 0.900
exuT
Mfs transporter, acs family, hexuronate transporter; Aldohexuronate transport system
    
 0.713
uxaC
Uronate isomerase; Evidence 1a: Function experimentally demonstrated in the studied strain; Product type e: enzyme
 
 
 
 0.577
exuM
Glycoside/pentoside/hexuronide:cation symporter, gph family; Uncharacterized symporter YjmB; Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type t: transporter
       0.570
exuR
Transcriptional regulator (laci family); Transcriptional repressor for the exu locus which is required for galacturonate utilization
     
 0.557
pksJ
Polyketide synthase of type i; Involved in some intermediate steps for the synthesis of the antibiotic polyketide bacillaene which is involved in secondary metabolism
  
 
 0.481
uxaB
Tagaturonate reductase (altronate oxidoreductase); Belongs to the mannitol dehydrogenase family. UxaB subfamily
    
 0.453
katE
Catalase-2; Decomposes hydrogen peroxide into water and oxygen; serves to protect cells from the toxic effects of hydrogen peroxide. Involved in sporulation
  
 
 0.436
Your Current Organism:
Bacillus subtilis
NCBI taxonomy Id: 224308
Other names: B. subtilis subsp. subtilis str. 168, Bacillus subtilis 168, Bacillus subtilis subsp. subtilis 168, Bacillus subtilis subsp. subtilis str. 168, Bacillus subtilis subsp. subtilis str. BGSC 1A700
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