Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ykoG | ykoH | BSU13250 | BSU13260 | Two-component response regulator [YkoH]; Probable member of the two-component regulatory system YkoH/YkoG. | Two-component sensor histidine kinase [YkoG]; Probable member of the two-component regulatory system YkoH/YkoG. Potentially phosphorylates YkoG. | 0.996 |
ykoG | ykoI | BSU13250 | BSU13270 | Two-component response regulator [YkoH]; Probable member of the two-component regulatory system YkoH/YkoG. | Conserved hypothetical protein; Evidence 4: Homologs of previously reported genes of unknown function. | 0.837 |
ykoG | ykoJ | BSU13250 | BSU13280 | Two-component response regulator [YkoH]; Probable member of the two-component regulatory system YkoH/YkoG. | Putative exported protein; Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; phenotype. | 0.642 |
ykoH | ykoG | BSU13260 | BSU13250 | Two-component sensor histidine kinase [YkoG]; Probable member of the two-component regulatory system YkoH/YkoG. Potentially phosphorylates YkoG. | Two-component response regulator [YkoH]; Probable member of the two-component regulatory system YkoH/YkoG. | 0.996 |
ykoH | ykoI | BSU13260 | BSU13270 | Two-component sensor histidine kinase [YkoG]; Probable member of the two-component regulatory system YkoH/YkoG. Potentially phosphorylates YkoG. | Conserved hypothetical protein; Evidence 4: Homologs of previously reported genes of unknown function. | 0.839 |
ykoH | ykoJ | BSU13260 | BSU13280 | Two-component sensor histidine kinase [YkoG]; Probable member of the two-component regulatory system YkoH/YkoG. Potentially phosphorylates YkoG. | Putative exported protein; Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; phenotype. | 0.863 |
ykoI | ykoG | BSU13270 | BSU13250 | Conserved hypothetical protein; Evidence 4: Homologs of previously reported genes of unknown function. | Two-component response regulator [YkoH]; Probable member of the two-component regulatory system YkoH/YkoG. | 0.837 |
ykoI | ykoH | BSU13270 | BSU13260 | Conserved hypothetical protein; Evidence 4: Homologs of previously reported genes of unknown function. | Two-component sensor histidine kinase [YkoG]; Probable member of the two-component regulatory system YkoH/YkoG. Potentially phosphorylates YkoG. | 0.839 |
ykoI | ykoJ | BSU13270 | BSU13280 | Conserved hypothetical protein; Evidence 4: Homologs of previously reported genes of unknown function. | Putative exported protein; Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; phenotype. | 0.541 |
ykoJ | ykoG | BSU13280 | BSU13250 | Putative exported protein; Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; phenotype. | Two-component response regulator [YkoH]; Probable member of the two-component regulatory system YkoH/YkoG. | 0.642 |
ykoJ | ykoH | BSU13280 | BSU13260 | Putative exported protein; Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; phenotype. | Two-component sensor histidine kinase [YkoG]; Probable member of the two-component regulatory system YkoH/YkoG. Potentially phosphorylates YkoG. | 0.863 |
ykoJ | ykoI | BSU13280 | BSU13270 | Putative exported protein; Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; phenotype. | Conserved hypothetical protein; Evidence 4: Homologs of previously reported genes of unknown function. | 0.541 |