Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| gerR | prkA | BSU15090 | BSU08970 | DNA-binding regulator; Evidence 1a: Function experimentally demonstrated in the studied strain; Product type r: regulator. | Serine protein kinase; Evidence 1a: Function experimentally demonstrated in the studied strain; Product type e: enzyme; Belongs to the PrkA family. | 0.508 |
| gerR | spoIVA | BSU15090 | BSU22800 | DNA-binding regulator; Evidence 1a: Function experimentally demonstrated in the studied strain; Product type r: regulator. | Morphogenetic stage IV sporulation protein; ATPase. Has a role at an early stage in the morphogenesis of the spore coat outer layers. Its ATP hydrolysis is required for proper assembly of the spore coat. Forms a basement layer around the outside surface of the forespore and self-assembles irreversibly into higher order structures by binding and hydrolyzing ATP thus creating a durable and stable platform upon which thereafter morphogenesis of the coat can take place. Required for proper localization of spore coat protein CotE and sporulation-specific proteins including SpoVM. | 0.730 |
| gerR | spoIVFA | BSU15090 | BSU27980 | DNA-binding regulator; Evidence 1a: Function experimentally demonstrated in the studied strain; Product type r: regulator. | Regulator of SpoIVFB (stage IV sporulation); Implicated in the coupling of mother cell to forespore gene expression. Required for spore formation at 37 degrees Celsius, but not at 30 degrees Celsius. SpoIVFA plays a central role in both maintaining the SpoIVFA/BofA/SpoIVFB complex and anchoring it to the outer forespore membrane. SpoIVFA brings BofA into close proximity to SpoIVFB, allowing BofA to inhibit SpoIVFB. Increased accumulation of SpoIVFA seems to inhibit the activity of SpoIVFB and thus regulates the activation of sigma-K. | 0.830 |
| gerR | spoVR | BSU15090 | BSU09400 | DNA-binding regulator; Evidence 1a: Function experimentally demonstrated in the studied strain; Product type r: regulator. | Involved in spore cortex synthesis (stage V sporulation); Appears to be involved in spore cortex formation. | 0.494 |
| gerR | yhbH | BSU15090 | BSU08980 | DNA-binding regulator; Evidence 1a: Function experimentally demonstrated in the studied strain; Product type r: regulator. | Factor involved in shape determination (sporulation); Evidence 1a: Function experimentally demonstrated in the studied strain; Product type f: factor. | 0.400 |
| gerR | ylaK | BSU15090 | BSU14810 | DNA-binding regulator; Evidence 1a: Function experimentally demonstrated in the studied strain; Product type r: regulator. | Putative phosphate starvation inducible protein; Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor; In the C-terminal section; belongs to the PhoH family. | 0.583 |
| gerR | ysxE | BSU15090 | BSU28100 | DNA-binding regulator; Evidence 1a: Function experimentally demonstrated in the studied strain; Product type r: regulator. | Spore coat protein; Evidence 1a: Function experimentally demonstrated in the studied strain; Product type cp: cell process. | 0.515 |
| glgC | prkA | BSU30970 | BSU08970 | Glucose-1-phosphate adenylyltransferase (ADP-glucose pyrophosphorylase) subunit alpha; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc. | Serine protein kinase; Evidence 1a: Function experimentally demonstrated in the studied strain; Product type e: enzyme; Belongs to the PrkA family. | 0.562 |
| glgC | spoVR | BSU30970 | BSU09400 | Glucose-1-phosphate adenylyltransferase (ADP-glucose pyrophosphorylase) subunit alpha; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc. | Involved in spore cortex synthesis (stage V sporulation); Appears to be involved in spore cortex formation. | 0.563 |
| glgC | ylaK | BSU30970 | BSU14810 | Glucose-1-phosphate adenylyltransferase (ADP-glucose pyrophosphorylase) subunit alpha; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc. | Putative phosphate starvation inducible protein; Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor; In the C-terminal section; belongs to the PhoH family. | 0.574 |
| glsB | ylaK | BSU14830 | BSU14810 | Glutaminase; Evidence 2b: Function of strongly homologous gene; Product type e: enzyme. | Putative phosphate starvation inducible protein; Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor; In the C-terminal section; belongs to the PhoH family. | 0.618 |
| prkA | gerR | BSU08970 | BSU15090 | Serine protein kinase; Evidence 1a: Function experimentally demonstrated in the studied strain; Product type e: enzyme; Belongs to the PrkA family. | DNA-binding regulator; Evidence 1a: Function experimentally demonstrated in the studied strain; Product type r: regulator. | 0.508 |
| prkA | glgC | BSU08970 | BSU30970 | Serine protein kinase; Evidence 1a: Function experimentally demonstrated in the studied strain; Product type e: enzyme; Belongs to the PrkA family. | Glucose-1-phosphate adenylyltransferase (ADP-glucose pyrophosphorylase) subunit alpha; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc. | 0.562 |
| prkA | spoIVA | BSU08970 | BSU22800 | Serine protein kinase; Evidence 1a: Function experimentally demonstrated in the studied strain; Product type e: enzyme; Belongs to the PrkA family. | Morphogenetic stage IV sporulation protein; ATPase. Has a role at an early stage in the morphogenesis of the spore coat outer layers. Its ATP hydrolysis is required for proper assembly of the spore coat. Forms a basement layer around the outside surface of the forespore and self-assembles irreversibly into higher order structures by binding and hydrolyzing ATP thus creating a durable and stable platform upon which thereafter morphogenesis of the coat can take place. Required for proper localization of spore coat protein CotE and sporulation-specific proteins including SpoVM. | 0.776 |
| prkA | spoVR | BSU08970 | BSU09400 | Serine protein kinase; Evidence 1a: Function experimentally demonstrated in the studied strain; Product type e: enzyme; Belongs to the PrkA family. | Involved in spore cortex synthesis (stage V sporulation); Appears to be involved in spore cortex formation. | 0.997 |
| prkA | yhbH | BSU08970 | BSU08980 | Serine protein kinase; Evidence 1a: Function experimentally demonstrated in the studied strain; Product type e: enzyme; Belongs to the PrkA family. | Factor involved in shape determination (sporulation); Evidence 1a: Function experimentally demonstrated in the studied strain; Product type f: factor. | 0.996 |
| prkA | ylaK | BSU08970 | BSU14810 | Serine protein kinase; Evidence 1a: Function experimentally demonstrated in the studied strain; Product type e: enzyme; Belongs to the PrkA family. | Putative phosphate starvation inducible protein; Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor; In the C-terminal section; belongs to the PhoH family. | 0.711 |
| prkA | ysxE | BSU08970 | BSU28100 | Serine protein kinase; Evidence 1a: Function experimentally demonstrated in the studied strain; Product type e: enzyme; Belongs to the PrkA family. | Spore coat protein; Evidence 1a: Function experimentally demonstrated in the studied strain; Product type cp: cell process. | 0.644 |
| spoIVA | gerR | BSU22800 | BSU15090 | Morphogenetic stage IV sporulation protein; ATPase. Has a role at an early stage in the morphogenesis of the spore coat outer layers. Its ATP hydrolysis is required for proper assembly of the spore coat. Forms a basement layer around the outside surface of the forespore and self-assembles irreversibly into higher order structures by binding and hydrolyzing ATP thus creating a durable and stable platform upon which thereafter morphogenesis of the coat can take place. Required for proper localization of spore coat protein CotE and sporulation-specific proteins including SpoVM. | DNA-binding regulator; Evidence 1a: Function experimentally demonstrated in the studied strain; Product type r: regulator. | 0.730 |
| spoIVA | prkA | BSU22800 | BSU08970 | Morphogenetic stage IV sporulation protein; ATPase. Has a role at an early stage in the morphogenesis of the spore coat outer layers. Its ATP hydrolysis is required for proper assembly of the spore coat. Forms a basement layer around the outside surface of the forespore and self-assembles irreversibly into higher order structures by binding and hydrolyzing ATP thus creating a durable and stable platform upon which thereafter morphogenesis of the coat can take place. Required for proper localization of spore coat protein CotE and sporulation-specific proteins including SpoVM. | Serine protein kinase; Evidence 1a: Function experimentally demonstrated in the studied strain; Product type e: enzyme; Belongs to the PrkA family. | 0.776 |
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