STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yoaA[ribosomal protein s5]-alanine n-acetyltransferase; Belongs to the acetyltransferase family (177 aa)    
Predicted Functional Partners:
yoxB
Conserved hypothetical protein; Uncharacterized protein YoxB; Evidence 4: Homologs of previously reported genes of unknown function
     
 0.974
yabR
Putative rna degradation protein; Belongs to the peptidase U57 family
      
 0.900
xynP
Glycoside/pentoside/hexuronide:cation symporter, gph family; Uncharacterized symporter YnaJ; Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pt: putative transporter
      
 0.782
yyaH
Lactoylglutathione lyase; Uncharacterized protein YyaH; Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe: putative enzyme
 
      0.752
yitI
Putative n-acetyltransferase; Belongs to the acetyltransferase family
 
    
 0.722
yodE
Ring-cleaving dioxygenase mhqe; Putative ring-cleavage dioxygenase that may contribute to the degradation of aromatic compounds
      
 0.712
sbp
Small basic protein; Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pm: putative membrane component
      
 0.650
mhqA
Putative hydroquinone-specific extradiol dioxygenase; Putative ring-cleavage dioxygenase that may contribute to the degradation of aromatic compounds
      
 0.585
xynB
Xylan 1,4-beta-xylosidase; Belongs to the glycosyl hydrolase 43 family
      
 0.584
yoxC
Conserved hypothetical protein; Uncharacterized protein YoxC; Evidence 4: Homologs of previously reported genes of unknown function
       0.524
Your Current Organism:
Bacillus subtilis
NCBI taxonomy Id: 224308
Other names: B. subtilis subsp. subtilis str. 168, Bacillus subtilis 168, Bacillus subtilis subsp. subtilis 168, Bacillus subtilis subsp. subtilis str. 168, Bacillus subtilis subsp. subtilis str. BGSC 1A700
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