Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| nrdEB | nrdIB | BSU20060 | BSU20070 | SPbeta phage ribonucleoside reductase alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides (By similarity); Belongs to the ribonucleoside diphosphate reductase large chain family. | SPbeta phage subunit of nucleoside diphosphate reductase; Probably involved in ribonucleotide reductase function. | 0.994 |
| nrdEB | yorW | BSU20060 | BSU20230 | SPbeta phage ribonucleoside reductase alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides (By similarity); Belongs to the ribonucleoside diphosphate reductase large chain family. | Hypothetical protein; Evidence 5: No homology to any previously reported sequences. | 0.729 |
| nrdEB | yosL | BSU20060 | BSU20080 | SPbeta phage ribonucleoside reductase alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides (By similarity); Belongs to the ribonucleoside diphosphate reductase large chain family. | Hypothetical protein; Evidence 5: No homology to any previously reported sequences. | 0.913 |
| nrdEB | yotI | BSU20060 | BSU19870 | SPbeta phage ribonucleoside reductase alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides (By similarity); Belongs to the ribonucleoside diphosphate reductase large chain family. | Conserved hypothetical protein; Evidence 4: Homologs of previously reported genes of unknown function. | 0.502 |
| nrdEB | yotJ | BSU20060 | BSU19860 | SPbeta phage ribonucleoside reductase alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides (By similarity); Belongs to the ribonucleoside diphosphate reductase large chain family. | Hypothetical protein; Evidence 5: No homology to any previously reported sequences. | 0.613 |
| nrdEB | yotK | BSU20060 | BSU19850 | SPbeta phage ribonucleoside reductase alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides (By similarity); Belongs to the ribonucleoside diphosphate reductase large chain family. | Conserved hypothetical protein; Evidence 4: Homologs of previously reported genes of unknown function. | 0.585 |
| nrdEB | yotM | BSU20060 | BSU19830 | SPbeta phage ribonucleoside reductase alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides (By similarity); Belongs to the ribonucleoside diphosphate reductase large chain family. | Hypothetical protein; Evidence 5: No homology to any previously reported sequences; extrachromosomal origin. | 0.553 |
| nrdIB | nrdEB | BSU20070 | BSU20060 | SPbeta phage subunit of nucleoside diphosphate reductase; Probably involved in ribonucleotide reductase function. | SPbeta phage ribonucleoside reductase alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides (By similarity); Belongs to the ribonucleoside diphosphate reductase large chain family. | 0.994 |
| nrdIB | yorW | BSU20070 | BSU20230 | SPbeta phage subunit of nucleoside diphosphate reductase; Probably involved in ribonucleotide reductase function. | Hypothetical protein; Evidence 5: No homology to any previously reported sequences. | 0.623 |
| nrdIB | yosL | BSU20070 | BSU20080 | SPbeta phage subunit of nucleoside diphosphate reductase; Probably involved in ribonucleotide reductase function. | Hypothetical protein; Evidence 5: No homology to any previously reported sequences. | 0.935 |
| nrdIB | yotI | BSU20070 | BSU19870 | SPbeta phage subunit of nucleoside diphosphate reductase; Probably involved in ribonucleotide reductase function. | Conserved hypothetical protein; Evidence 4: Homologs of previously reported genes of unknown function. | 0.499 |
| nrdIB | yotJ | BSU20070 | BSU19860 | SPbeta phage subunit of nucleoside diphosphate reductase; Probably involved in ribonucleotide reductase function. | Hypothetical protein; Evidence 5: No homology to any previously reported sequences. | 0.597 |
| nrdIB | yotK | BSU20070 | BSU19850 | SPbeta phage subunit of nucleoside diphosphate reductase; Probably involved in ribonucleotide reductase function. | Conserved hypothetical protein; Evidence 4: Homologs of previously reported genes of unknown function. | 0.641 |
| nrdIB | yotM | BSU20070 | BSU19830 | SPbeta phage subunit of nucleoside diphosphate reductase; Probably involved in ribonucleotide reductase function. | Hypothetical protein; Evidence 5: No homology to any previously reported sequences; extrachromosomal origin. | 0.609 |
| yorW | nrdEB | BSU20230 | BSU20060 | Hypothetical protein; Evidence 5: No homology to any previously reported sequences. | SPbeta phage ribonucleoside reductase alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides (By similarity); Belongs to the ribonucleoside diphosphate reductase large chain family. | 0.729 |
| yorW | nrdIB | BSU20230 | BSU20070 | Hypothetical protein; Evidence 5: No homology to any previously reported sequences. | SPbeta phage subunit of nucleoside diphosphate reductase; Probably involved in ribonucleotide reductase function. | 0.623 |
| yorW | yosL | BSU20230 | BSU20080 | Hypothetical protein; Evidence 5: No homology to any previously reported sequences. | Hypothetical protein; Evidence 5: No homology to any previously reported sequences. | 0.623 |
| yorW | yotI | BSU20230 | BSU19870 | Hypothetical protein; Evidence 5: No homology to any previously reported sequences. | Conserved hypothetical protein; Evidence 4: Homologs of previously reported genes of unknown function. | 0.619 |
| yorW | yotJ | BSU20230 | BSU19860 | Hypothetical protein; Evidence 5: No homology to any previously reported sequences. | Hypothetical protein; Evidence 5: No homology to any previously reported sequences. | 0.641 |
| yorW | yotK | BSU20230 | BSU19850 | Hypothetical protein; Evidence 5: No homology to any previously reported sequences. | Conserved hypothetical protein; Evidence 4: Homologs of previously reported genes of unknown function. | 0.623 |
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