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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yosVConserved hypothetical protein; Evidence 4: Homologs of previously reported genes of unknown function. (96 aa)    
Predicted Functional Partners:
yojW
Hypothetical protein; Evidence 5: No homology to any previously reported sequences.
  
    0.886
yosW
Conserved hypothetical protein; Evidence 4: Homologs of previously reported genes of unknown function.
  
    0.745
yosX
Conserved hypothetical protein; Evidence 4: Homologs of previously reported genes of unknown function.
  
    0.720
yosL
Hypothetical protein; Evidence 5: No homology to any previously reported sequences.
   
    0.627
yosK
Hypothetical protein; Evidence 5: No homology to any previously reported sequences.
   
    0.595
yotI
Conserved hypothetical protein; Evidence 4: Homologs of previously reported genes of unknown function.
   
    0.579
yosH
Conserved hypothetical protein; Evidence 4: Homologs of previously reported genes of unknown function.
   
    0.575
yotM
Hypothetical protein; Evidence 5: No homology to any previously reported sequences; extrachromosomal origin.
   
    0.541
yosU
Hypothetical protein; Evidence 5: No homology to any previously reported sequences.
  
    0.536
yosQ
SPbeta phage endodeoxyribonuclease (homing endonuclease, responsible for intron mobility); A possible homing endonuclease, it is entirely encoded within the YosP intron.
   
    0.519
Your Current Organism:
Bacillus subtilis 168
NCBI taxonomy Id: 224308
Other names: B. subtilis subsp. subtilis str. 168, Bacillus subtilis subsp. subtilis 168, Bacillus subtilis subsp. subtilis str. 168, Bacillus subtilis subsp. subtilis str. BGSC 1A700
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