STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yoqNHypothetical protein; Evidence 5: No homology to any previously reported sequences. (72 aa)    
Predicted Functional Partners:
yoqP
Hypothetical protein; Evidence 5: No homology to any previously reported sequences.
   
    0.731
yoqS
Hypothetical protein; Evidence 5: No homology to any previously reported sequences.
   
    0.685
yoqR
Hypothetical protein; Evidence 5: No homology to any previously reported sequences.
   
    0.671
yoqJ
Conserved hypothetical protein; Evidence 4: Homologs of previously reported genes of unknown function.
   
    0.615
yorM
Conserved hypothetical protein; Evidence 4: Homologs of previously reported genes of unknown function.
   
    0.535
yorL
Putative DNA polymerase; Probable DNA polymerase; Belongs to the DNA polymerase type-C family.
   
    0.529
nrdIB
SPbeta phage subunit of nucleoside diphosphate reductase; Probably involved in ribonucleotide reductase function.
   
    0.526
yoqC
Putative nucleotide-binding protein; Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pf: putative factor.
   
    0.512
yoqM
Putative membrane bound protein; Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pm: putative membrane component.
  
    0.511
yoqK
Hypothetical protein; Evidence 5: No homology to any previously reported sequences.
   
    0.510
Your Current Organism:
Bacillus subtilis 168
NCBI taxonomy Id: 224308
Other names: B. subtilis subsp. subtilis str. 168, Bacillus subtilis subsp. subtilis 168, Bacillus subtilis subsp. subtilis str. 168, Bacillus subtilis subsp. subtilis str. BGSC 1A700
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.