Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| recU | yppC | BSU22310 | BSU22300 | Holliday junction resolvase; Has at least 2 separable functions; Holliday junction resolution with generation of monomeric chromosomes, and modulation of RecA activity. Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation. Partially inhibits the hydrolysis of dATP or rATP by RecA. Holliday junction resolution is stimulated by RuvB. | Conserved hypothetical protein; Evidence 4: Homologs of previously reported genes of unknown function. | 0.622 |
| spoIIGA | spoVID | BSU15310 | BSU28110 | Protease processing pro-sigma-E; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | Morphogenetic spore protein (stage VI sporulation); Required for assembly of a normal spore coat. May be a component of the innermost layer of the spore coat that aids in its adherence to the prespore. | 0.748 |
| spoIIGA | yabQ | BSU15310 | BSU00610 | Protease processing pro-sigma-E; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | Membrane protein of the forespore; Required for sporulation. Plays an important role in cortex and coat formation. | 0.788 |
| spoIIGA | yppC | BSU15310 | BSU22300 | Protease processing pro-sigma-E; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | Conserved hypothetical protein; Evidence 4: Homologs of previously reported genes of unknown function. | 0.632 |
| spoIIGA | yqgE | BSU15310 | BSU25010 | Protease processing pro-sigma-E; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | Putative efflux transporter; Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pt: putative transporter. | 0.485 |
| spoIIGA | ywmB | BSU15310 | BSU36770 | Protease processing pro-sigma-E; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | Conserved hypothetical protein; Evidence 4: Homologs of previously reported genes of unknown function. | 0.501 |
| spoVID | spoIIGA | BSU28110 | BSU15310 | Morphogenetic spore protein (stage VI sporulation); Required for assembly of a normal spore coat. May be a component of the innermost layer of the spore coat that aids in its adherence to the prespore. | Protease processing pro-sigma-E; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | 0.748 |
| spoVID | yabQ | BSU28110 | BSU00610 | Morphogenetic spore protein (stage VI sporulation); Required for assembly of a normal spore coat. May be a component of the innermost layer of the spore coat that aids in its adherence to the prespore. | Membrane protein of the forespore; Required for sporulation. Plays an important role in cortex and coat formation. | 0.772 |
| spoVID | yppC | BSU28110 | BSU22300 | Morphogenetic spore protein (stage VI sporulation); Required for assembly of a normal spore coat. May be a component of the innermost layer of the spore coat that aids in its adherence to the prespore. | Conserved hypothetical protein; Evidence 4: Homologs of previously reported genes of unknown function. | 0.620 |
| spoVID | yqgE | BSU28110 | BSU25010 | Morphogenetic spore protein (stage VI sporulation); Required for assembly of a normal spore coat. May be a component of the innermost layer of the spore coat that aids in its adherence to the prespore. | Putative efflux transporter; Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pt: putative transporter. | 0.750 |
| spoVID | yunC | BSU28110 | BSU32360 | Morphogenetic spore protein (stage VI sporulation); Required for assembly of a normal spore coat. May be a component of the innermost layer of the spore coat that aids in its adherence to the prespore. | Putative RNA binding protein; Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pf: putative factor. | 0.419 |
| spoVID | ywgA | BSU28110 | BSU37590 | Morphogenetic spore protein (stage VI sporulation); Required for assembly of a normal spore coat. May be a component of the innermost layer of the spore coat that aids in its adherence to the prespore. | Conserved hypothetical protein; Evidence 4: Homologs of previously reported genes of unknown function; PubMedId: 16855250. | 0.464 |
| spoVID | ywmB | BSU28110 | BSU36770 | Morphogenetic spore protein (stage VI sporulation); Required for assembly of a normal spore coat. May be a component of the innermost layer of the spore coat that aids in its adherence to the prespore. | Conserved hypothetical protein; Evidence 4: Homologs of previously reported genes of unknown function. | 0.522 |
| yabQ | spoIIGA | BSU00610 | BSU15310 | Membrane protein of the forespore; Required for sporulation. Plays an important role in cortex and coat formation. | Protease processing pro-sigma-E; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | 0.788 |
| yabQ | spoVID | BSU00610 | BSU28110 | Membrane protein of the forespore; Required for sporulation. Plays an important role in cortex and coat formation. | Morphogenetic spore protein (stage VI sporulation); Required for assembly of a normal spore coat. May be a component of the innermost layer of the spore coat that aids in its adherence to the prespore. | 0.772 |
| yabQ | yppC | BSU00610 | BSU22300 | Membrane protein of the forespore; Required for sporulation. Plays an important role in cortex and coat formation. | Conserved hypothetical protein; Evidence 4: Homologs of previously reported genes of unknown function. | 0.621 |
| yabQ | yqgE | BSU00610 | BSU25010 | Membrane protein of the forespore; Required for sporulation. Plays an important role in cortex and coat formation. | Putative efflux transporter; Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pt: putative transporter. | 0.760 |
| yabQ | ywgA | BSU00610 | BSU37590 | Membrane protein of the forespore; Required for sporulation. Plays an important role in cortex and coat formation. | Conserved hypothetical protein; Evidence 4: Homologs of previously reported genes of unknown function; PubMedId: 16855250. | 0.499 |
| yabQ | ywmB | BSU00610 | BSU36770 | Membrane protein of the forespore; Required for sporulation. Plays an important role in cortex and coat formation. | Conserved hypothetical protein; Evidence 4: Homologs of previously reported genes of unknown function. | 0.635 |
| ypbD | yppC | BSU23010 | BSU22300 | Putative membrane protease; Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe: putative enzyme. | Conserved hypothetical protein; Evidence 4: Homologs of previously reported genes of unknown function. | 0.671 |
page 1 of 3