Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
yqbHConserved hypothetical protein; Evidence 4: Homologs of previously reported genes of unknown function; To B.subtilis XkdH. (120 aa)    
Predicted Functional Partners:
yqbI
Conserved hypothetical protein; Evidence 4: Homologs of previously reported genes of unknown function; To B.subtilis XkdI.
  
    0.933
yqbG
Conserved hypothetical protein; Evidence 4: Homologs of previously reported genes of unknown function.
  
    0.832
yqbJ
Conserved hypothetical protein; Evidence 4: Homologs of previously reported genes of unknown function; To B.subtilis XkdJ.
  
    0.819
yqbE
Putative phage capsid protein; Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type ps: putative structure; To B.subtilis XkdG.
  
    0.795
yqbF
Hypothetical protein; Evidence 5: No homology to any previously reported sequences.
  
    0.788
yqbK
Conserved hypothetical protein; Evidence 4: Homologs of previously reported genes of unknown function; Belongs to the myoviridae tail sheath protein family.
  
    0.782
yqbM
Conserved hypothetical protein; Evidence 4: Homologs of previously reported genes of unknown function; PubMedId: 8760915, 8969508; To B.subtilis XkdM.
  
    0.777
yqzN
Conserved hypothetical protein; Evidence 4: Homologs of previously reported genes of unknown function.
       0.774
yqbD
Putative DNA wielding protein; Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe: putative enzyme.
  
    0.750
yqbC
Conserved hypothetical protein; Evidence 4: Homologs of previously reported genes of unknown function.
  
    0.630
Your Current Organism:
Bacillus subtilis 168
NCBI taxonomy Id: 224308
Other names: B. subtilis subsp. subtilis str. 168, Bacillus subtilis subsp. subtilis 168, Bacillus subtilis subsp. subtilis str. 168, Bacillus subtilis subsp. subtilis str. BGSC 1A700
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