STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
azlDBranched-chain amino acid transport protein azld; Involved in branched-chain amino acid transport (110 aa)    
Predicted Functional Partners:
azlC
Branched-chain amino acid transport protein azlc; Involved in branched-chain amino acid transport
   
 0.999
azlB
Transcriptional regulator (lrp/asnc family); Transcriptional repressor of the azlBCD operon involved in branched-chain amino acid transport
     
 0.940
yrdK
Hypothetical protein; Uncharacterized protein YrdK; Evidence 5: No homology to any previously reported sequences
     
 0.616
brnQ
Branched-chain amino acid transport system carrier protein brnq; Component of the transport system for branched-chain amino acids (leucine, isoleucine and valine) Which is coupled to a proton motive force
     
 0.574
cotV
Spore coat protein V; Evidence 1a: Function experimentally demonstrated in the studied strain; Product type cp: cell process
      
 0.448
yjmC
Uncharacterized oxidoreductase YjmC; Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe: putative enzyme
  
   
 0.445
samT
Bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase; Evidence 2a: Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme; In the C-terminal section; belongs to the methylenetetrahydrofolate reductase family
       0.422
cypA
Cytochrome P450; Evidence 2a: Function of homologous gene experimentally demonstrated in an other organism; Product type e: enzyme
     
 0.422
yefB
Putative site-specific recombinase / invertase; Uncharacterized protein YefB; Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe: putative enzyme
  
   
 0.421
ybfH
Uncharacterized transporter YbhF; Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pt: putative transporter
  
     0.409
Your Current Organism:
Bacillus subtilis
NCBI taxonomy Id: 224308
Other names: B. subtilis subsp. subtilis str. 168, Bacillus subtilis 168, Bacillus subtilis subsp. subtilis 168, Bacillus subtilis subsp. subtilis str. 168, Bacillus subtilis subsp. subtilis str. BGSC 1A700
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