STRINGSTRING
glcD protein (Bacillus subtilis) - STRING interaction network
"glcD" - Glycolate oxidase subunit GlcD in Bacillus subtilis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
Coexpression
Experiments
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Textmining
[Homology]
Score
glcDGlycolate oxidase subunit GlcD; Evidence 2a- Function of homologous gene experimentally demonstrated in an other organism; Product type e- enzyme (470 aa)    
Predicted Functional Partners:
glcF
Probable glycolate oxidase iron-sulfur subunit; Evidence 2a- Function of homologous gene experimentally demonstrated in an other organism; Product type e- enzyme (444 aa)
 
  0.999
yvcT
Probable 2-ketogluconate reductase; Evidence 3- Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe- putative enzyme (325 aa)
 
 
  0.922
katE
Catalase-2; Decomposes hydrogen peroxide into water and oxygen; serves to protect cells from the toxic effects of hydrogen peroxide. Involved in sporulation (686 aa)
   
  0.915
katX
Catalase X; Decomposes hydrogen peroxide into water and oxygen; serves to protect cells from the toxic effects of hydrogen peroxide; Belongs to the catalase family (547 aa)
      
  0.911
katA
Vegetative catalase; Decomposes hydrogen peroxide into water and oxygen; serves to protect cells from the toxic effects of hydrogen peroxide; Belongs to the catalase family (483 aa)
      
  0.911
kdgA
KHG/KDPG aldolase; Evidence 2a- Function of homologous gene experimentally demonstrated in an other organism; Product type e- enzyme (196 aa)
          
  0.904
ysfB
Uncharacterized protein YsfB; Evidence 3- Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pr- putative regulator; Belongs to the CdaR family (368 aa)
 
          0.685
yuaI
Uncharacterized N-acetyltransferase YuaI; Evidence 3- Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe- putative enzyme; Belongs to the acetyltransferase family (173 aa)
            
  0.681
yugJ
Probable NADH-dependent butanol dehydrogenase 1; Evidence 3- Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe- putative enzyme (387 aa)
            
  0.663
lutA
Lactate utilization protein A; Is essential for L-lactate degradation and allows cells to grow with lactate as the sole carbon source. May also allow cells to utilize an alternative carbon source during biofilm formation, since it contributes to the formation of architecturally complex communities when lactate is present (238 aa)
   
  0.643
Your Current Organism:
Bacillus subtilis
NCBI taxonomy Id: 224308
Other names: B. subtilis subsp. subtilis str. 168, Bacillus subtilis, Bacillus subtilis 168, Bacillus subtilis subsp. subtilis 168, Bacillus subtilis subsp. subtilis str. 168, Bacillus subtilis subsp. subtilis str. BGSC 1A700
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