STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ytrCAcetoin utilization transport system permease protein; Part of the ABC transporter complex YtrBCDEF that plays a role in acetoin utilization during stationary phase and sporulation (328 aa)    
Predicted Functional Partners:
ytrB
Acetoin utilization transport system atp-binding protein; Part of the ABC transporter complex YtrBCDEF that plays a role in acetoin utilization during stationary phase and sporulation
 
   
 0.993
ytrF
Acetoin utilization transport system permease protein; Part of the ABC transporter complex YtrBCDEF that plays a role in acetoin utilization during stationary phase and sporulation
 
   
 0.992
ytrE
Acetoin utilization transport system atp-binding protein; Part of the ABC transporter complex YtrBCDEF that plays a role in acetoin utilization during stationary phase and sporulation
     
 0.990
ytrA
Transcriptional regulator (gntr family); Negatively regulates ABC transporter complex ytrBCDEF that plays a role in acetoin utilization during stationary phase and sporulation
 
   
 0.970
ytrD
Acetoin utilization transport system permease protein; Part of the ABC transporter complex YtrBCDEF that plays a role in acetoin utilization during stationary phase and sporulation
 
  
0.953
rapA
Response regulator aspartate phosphatase a (stage 0 sporulation protein l); Prevents sporulation by dephosphorylating Spo0F
  
     0.779
spoIIB
Stage ii sporulation protein b; Involved in endospore development
  
     0.777
ydaN
Uncharacterized protein YdaN; Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pr: putative regulator
  
     0.776
rapB
Response regulator aspartate phosphatase b; Prevents sporulation by dephosphorylating Spo0F
  
     0.775
rapJ
Response regulator aspartate phosphatase J; Evidence 1a: Function experimentally demonstrated in the studied strain; Product type e: enzyme
  
     0.773
Your Current Organism:
Bacillus subtilis
NCBI taxonomy Id: 224308
Other names: B. subtilis subsp. subtilis str. 168, Bacillus subtilis 168, Bacillus subtilis subsp. subtilis 168, Bacillus subtilis subsp. subtilis str. 168, Bacillus subtilis subsp. subtilis str. BGSC 1A700
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