Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ytzLConserved hypothetical protein; Evidence 4: Homologs of previously reported genes of unknown function. (52 aa)    
Predicted Functional Partners:
yrzQ
Conserved hypothetical protein; Evidence 4: Homologs of previously reported genes of unknown function.
   
  
 0.984
yrzR
Conserved hypothetical protein; Evidence 4: Homologs of previously reported genes of unknown function.
   
    0.819
ypzG
Conserved hypothetical protein; Evidence 4: Homologs of previously reported genes of unknown function.
   
    0.744
ykzP
Conserved hypothetical protein; Evidence 4: Homologs of previously reported genes of unknown function.
   
    0.730
ythB
Putative cytochrome bd menaquinol oxidase subunit II; May have a role in sporulation. Can compensate for the loss of cytochrome aa3; Belongs to the cytochrome ubiquinol oxidase subunit 2 family.
       0.628
sspN
Small acid-soluble spore protein; Evidence 1a: Function experimentally demonstrated in the studied strain; Product type f: factor; Belongs to the SspN family.
   
    0.626
yizC
Conserved hypothetical protein; Evidence 4: Homologs of previously reported genes of unknown function.
   
    0.618
yozQ
Conserved hypothetical protein; Evidence 4: Homologs of previously reported genes of unknown function.
   
    0.613
sspK
Small acid-soluble spore protein; Evidence 1a: Function experimentally demonstrated in the studied strain; Product type cp: cell process; Belongs to the SspK family.
   
    0.611
yoyE
Conserved hypothetical protein; Evidence 4: Homologs of previously reported genes of unknown function.
   
    0.603
Your Current Organism:
Bacillus subtilis 168
NCBI taxonomy Id: 224308
Other names: B. subtilis subsp. subtilis str. 168, Bacillus subtilis subsp. subtilis 168, Bacillus subtilis subsp. subtilis str. 168, Bacillus subtilis subsp. subtilis str. BGSC 1A700
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