STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
frlMRaffinose/stachyose/melibiose transport system permease protein; Probably part of the binding-protein-dependent transport system YurMNO. Probably responsible for the translocation of the substrate across the membrane (300 aa)    
Predicted Functional Partners:
frlN
Raffinose/stachyose/melibiose transport system permease protein; Probably part of the binding-protein-dependent transport system YurMNO. Probably responsible for the translocation of the substrate across the membrane
 0.999
frlO
Raffinose/stachyose/melibiose transport system substrate-binding protein; Probably part of the binding-protein-dependent transport system YurMNO
 
 0.998
yurJ
Putative multiple sugar abc transporter (atp-binding protein); Belongs to the ABC transporter superfamily
 0.996
msmX
Multiple sugar-binding transporter atp-binding protein; Part of the ABC transporter complex involved in maltodextrin import (Probable). Is also part of the ABC transporter complex MelEDC- MsmX involved in melibiose, raffinose and stachyose import . Probably responsible for energy coupling to the transport system (Probable)
 0.990
frlD
Fructosamine kinase frld; Catalyzes the phosphorylation of a range of fructosamines to fructosamine 6-phosphates
 
   
 0.985
amyD
Raffinose/stachyose/melibiose transport system permease protein; Part of the ABC transporter complex MelEDC-MsmX involved in melibiose, raffinose and stachyose import. Probably responsible for the translocation of the substrate across the membrane
 0.974
frlB
Fructoselysine 6-phosphate deglycase; Catalyzes the conversion of a range of fructosamine 6- phosphates to glucose 6-phosphate and a free amino acid
 
   
 0.957
araP
Arabinosaccharide transport system permease protein; Part of the binding-protein-dependent transport system for L- arabinose. Probably responsible for the translocation of the substrate across the membrane
 
 0.910
frlR
Uncharacterized HTH-type transcriptional regulator YurK; Evidence 1a: Function experimentally demonstrated in the studied strain; Product type r: regulator
     
 0.901
msmE
Raffinose/stachyose/melibiose transport system substrate-binding protein; Part of the ABC transporter complex MelEDC-MsmX involved in melibiose, raffinose and stachyose import. Binds melibiose, raffinose and stachyose
 
 0.873
Your Current Organism:
Bacillus subtilis
NCBI taxonomy Id: 224308
Other names: B. subtilis subsp. subtilis str. 168, Bacillus subtilis 168, Bacillus subtilis subsp. subtilis 168, Bacillus subtilis subsp. subtilis str. 168, Bacillus subtilis subsp. subtilis str. BGSC 1A700
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